R: Fitting and Analysing Thermal Performance Curves

# Fitting and Analysing Thermal Performance Curves

## Documentation for package ‘rTPC’ version 1.0.4

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

bacteria_tpc | Example thermal performance curves of bacterial growth
beta_2012 | Beta model for fitting thermal performance curves
boatman_2017 | Boatman model for fitting thermal performance curves
briere2_1999 | Briere2 model for fitting thermal performance curves
calc_params | Calculate extra parameters of a thermal performance curve
chlorella_tpc | Example metabolic thermal performance curves
delong_2017 | DeLong enzyme-assisted Arrhenius model for fitting thermal performance curves
deutsch_2008 | Modified deutsch model for fitting thermal performance curves
flinn_1991 | Flinn model for fitting thermal performance curves
gaussian_1987 | Gaussian model for fitting thermal performance curves
get_breadth | Estimate thermal performance breadth of a thermal performance curve
get_ctmax | Estimate the critical thermal maximum of a thermal performance curve
get_ctmin | Estimate the critical thermal minimum of a thermal performance curve
get_e | Estimate the activation energy of a thermal performance curve
get_eh | Estimate the deactivation energy of a thermal performance curve
get_lower_lims | Set broad lower limits on parameter values
get_model_names | Lists the models available in rTPC
get_q10 | Estimate the q10 value of a thermal performance curve
get_rmax | Estimate maximum rate of a thermal performance curve
get_skewness | Estimates skewness of a thermal performance curve
get_start_vals | Estimate start values for TPC fitting
get_thermalsafetymargin | Estimate thermal safety margin of a thermal performance curve
get_thermaltolerance | Estimate thermal tolerance of a thermal performance curve
get_topt | Estimate optimum temperature of a thermal performance curve
get_upper_lims | Set broad upper limits on parameter values
hinshelwood_1947 | Hinshelwood model for fitting thermal performance curves
joehnk_2008 | Jöhnk model for fitting thermal performance curves
johnsonlewin_1946 | Johnson-Lewin model for fitting thermal performance curves
kamykowski_1985 | Kamykowski model for fitting thermal performance curves
lactin2_1995 | Lactin2 model for fitting thermal performance curves
lrf_1991 | Lobry-Rosso-Flandros (LRF) model for fitting thermal performance curves
modifiedgaussian_2006 | Modified gaussian model for fitting thermal performance curves
oneill_1972 | O'Neill model for fitting thermal performance curves
pawar_2018 | Pawar model for fitting thermal performance curves
quadratic_2008 | Quadratic model for fitting thermal performance curves
ratkowsky_1983 | Ratkowsky model for fitting thermal performance curves
rezende_2019 | Rezende model for fitting thermal performance curves
sharpeschoolfull_1981 | Full Sharpe-Schoolfield model for fitting thermal performance curves
sharpeschoolhigh_1981 | Sharpe-Schoolfield model (high temperature inactivation only) for fitting thermal performance curves
sharpeschoollow_1981 | Sharpe-Schoolfield model (low temperature inactivation only) for fitting thermal performance curves
spain_1982 | Spain model for fitting thermal performance curves
thomas_2012 | Thomas model (2012) for fitting thermal performance curves
thomas_2017 | Thomas model (2017) for fitting thermal performance curves
weibull_1995 | Weibull model for fitting thermal performance curves