knockoffDMC             Group knockoffs of discrete Markov chains
knockoffGenotypes       Group-knockoffs of unphased genotypes
knockoffHMM             Group knockoffs of hidden Markov models
knockoffHaplotypes      Group-knockoffs of phased haplotypes
loadHMM                 Load HMM parameters fitted by fastPHASE
runFastPhase            Fit an HMM to genetic data using fastPHASE
sampleDMC               Sample discrete Markov chains
sampleHMM               Sample hidden Markov models
writeXtoInp             Convert genotypes X into the fastPHASE input
                        format
