# Generated by roxygen2: do not edit by hand

S3method("[",generic.data.table)
S3method(as.data.frame,generic.data.table)
S3method(as.matrix,generic.data.table)
S3method(dimnames,generic.data.table)
S3method(print,generic.data.table)
S3method(print,summary.SQM)
S3method(print,summary.SQMbunch)
S3method(print,summary.SQMlite)
S3method(rbind,generic.data.table)
S3method(summary,SQM)
S3method(summary,SQMbunch)
S3method(summary,SQMlite)
export(SQM_to_microeco)
export(SQM_to_phyloseq)
export(combineSQM)
export(combineSQMlite)
export(create_bin)
export(exportBins)
export(exportContigs)
export(exportKrona)
export(exportORFs)
export(exportPathway)
export(exportTable)
export(find_redundant_contigs)
export(loadSQM)
export(loadSQMlite)
export(mostAbundant)
export(mostVariable)
export(plotBars)
export(plotBins)
export(plotFunctions)
export(plotHeatmap)
export(plotTaxonomy)
export(remove_contigs_from_bin)
export(renameSamples)
export(rowMaxs)
export(rowMins)
export(seqvec2fasta)
export(subsetBins)
export(subsetContigs)
export(subsetFun)
export(subsetORFs)
export(subsetRand)
export(subsetSamples)
export(subsetTax)
importFrom(Biostrings,
  BStringSet,
  DNAStringSet,
  readBStringSet,
  readDNAStringSet,
  writeXStringSet
)
importFrom(data.table,data.table)
importFrom(grDevices,
  colorRampPalette,
  dev.off,
  png
)
importFrom(graphics,
  plot,
  rasterImage,
  text
)
importFrom(stats,
  aggregate,
  median,
  sd,
  setNames
)
importFrom(utils,
  combn,
  getFromNamespace,
  globalVariables,
  installed.packages,
  read.table,
  tail,
  write.table
)
importFrom(zip,
  unzip,
  zip_list
)
