Package: statgenIBD
Type: Package
Title: Calculation of IBD Probabilities
Description: For biparental, three and four-way crosses Identity by Descent 
    (IBD) probabilities can be calculated using Hidden Markov Models and 
    inheritance vectors following Lander and Green
    (<https://www.jstor.org/stable/29713>) and Huang
    (<doi:10.1073/pnas.1100465108>). One of a series of statistical genetic 
    packages for streamlining the analysis of typical plant breeding experiments
    developed by Biometris.
Version: 1.0.9
Date: 2025-06-30
Authors@R: c(person(given = "Martin", 
                    family = "Boer", 
                    email = "martin.boer@wur.nl", 
                    role = "aut",
                    comment = c(ORCID = "0000-0002-1879-4588")),
            person(given = "Bart-Jan", 
                   family = "van Rossum", 
                   email = "bart-jan.vanrossum@wur.nl", 
                   role = c("aut", "cre"),
                   comment = c(ORCID = "0000-0002-8673-2514")),
            person(given = "Wenhao", 
                   family = "Li", 
                   role = "ctb",
                   comment = c(ORCID = "0000-0001-5719-5775")),
            person(given = "Johannes", 
                   family = "Kruisselbrink",
                   role = "ctb",
                   comment = c(ORCID = "0000-0003-1673-5725")))
License: GPL
Encoding: UTF-8
Depends: R (>= 3.6)
Imports: data.table, ggplot2, Matrix, R.utils, rlang, Rcpp, statgenGWAS
        (>= 1.0.9), stringi
LinkingTo: Rcpp, RcppArmadillo
RoxygenNote: 7.3.2
Suggests: rmarkdown, knitr, tinytest
VignetteBuilder: knitr
URL: https://biometris.github.io/statgenIBD/index.html,
        https://github.com/Biometris/statgenIBD/
BugReports: https://github.com/Biometris/statgenIBD/issues
NeedsCompilation: yes
Packaged: 2025-07-01 06:37:48 UTC; rossu027
Author: Martin Boer [aut] (ORCID: <https://orcid.org/0000-0002-1879-4588>),
  Bart-Jan van Rossum [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-8673-2514>),
  Wenhao Li [ctb] (ORCID: <https://orcid.org/0000-0001-5719-5775>),
  Johannes Kruisselbrink [ctb] (ORCID:
    <https://orcid.org/0000-0003-1673-5725>)
Maintainer: Bart-Jan van Rossum <bart-jan.vanrossum@wur.nl>
Repository: CRAN
Date/Publication: 2025-07-01 07:00:02 UTC
Built: R 4.3.3; x86_64-apple-darwin20; 2025-07-01 08:50:39 UTC; unix
Archs: statgenIBD.so.dSYM
