geiger-package	geiger-package
aicm	aicm
aicw	aicw
amphibia	geiger-data
aov.phylo	aov.phylo
area.between.curves	geiger-defunct
argn	geiger-internal
argn.bm	geiger-internal
argn.default	geiger-internal
argn.mkn	geiger-internal
argn<-	geiger-internal
argn<-.bm	geiger-internal
as.phylo.hphylo	geiger-internal
as.Qmatrix.gfit	fitDiscrete
bd.km	bd.ms
bd.ms	bd.ms
BDsim	geiger-defunct
bf	geiger-internal
birthdeath.tree	geiger-defunct
bm.lik	geiger-internal
calibrate.mecca	calibrate.mecca
calibrate.proposalwidth	geiger-defunct
calibrate.rjmcmc	calibrate.rjmcmc
caniformia	geiger-data
carnivores	geiger-data
caudata	geiger-data
chelonia	geiger-data
cherries	geiger-internal
coef.gfit	geiger-internal
coef.gfits	geiger-internal
compare.rates	geiger-defunct
congruify.phylo	congruify.phylo
constrain	geiger-internal
constrain.k	geiger-internal
constrain.m	geiger-internal
crown.limits	bd.ms
crown.p	bd.ms
dcount	dcount
deltaTree	geiger-defunct
disp.calc	geiger-defunct
disparity	dtt
dlunif	geiger-internal
drop.extinct	drop.extinct
drop.random	drop.extinct
drop.tip	geiger-internal
dtpois	geiger-internal
dtt	dtt
dtt.full	geiger-defunct
edgelabels.auteur	geiger-internal
edges.phylo	geiger-internal
ess	geiger-internal
ex.jumpsimulator	geiger-examples
ex.ratesimulator	geiger-examples
ex.traitgram	geiger-examples
exemplar.phylo	geiger-internal
exponentialchangeTree	geiger-defunct
fitContinuous	fitContinuous
fitContinuousMCMC	fitContinuousMCMC
fitDiscrete	fitDiscrete
fitDiversification	geiger-internal
fitSplitModel	geiger-internal
gbcontain	gbresolve
gbresolve	gbresolve
gbresolve.default	geiger-internal
gbresolve.phylo	gbresolve
gbtaxdump	geiger-internal
geiger	geiger-package
geiger-defunct	geiger-defunct
gen	geiger-internal
geospiza	geiger-data
get.simulation.matrix	geiger-defunct
getAncStates	geiger-defunct
getBD	geiger-internal
getDiversificationModel	geiger-internal
getFullSplitModel	geiger-internal
glomogram.phylo	nodelabel.phylo
hash.node	geiger-internal
hashes.phylo	geiger-internal
hashes.rjmcmc	geiger-internal
hdr	geiger-internal
heights	geiger-internal
heights.multiPhylo	geiger-internal
heights.phylo	geiger-internal
hme	geiger-internal
ic.sigma	geiger-defunct
intercalate.samples	geiger-defunct
is.constrained	geiger-internal
is.extinct	drop.extinct
is.phylo	geiger-internal
is.root	geiger-internal
kappaTree	geiger-defunct
kendallmoran.rate	geiger-internal
lambdaTree	geiger-defunct
likfx.bm	geiger-internal
linearchangeTree	geiger-defunct
Linnaean	geiger-internal
load	geiger-internal
load.rjmcmc	load.rjmcmc
logLik.gfit	geiger-internal
logLik.gfits	geiger-internal
lookup.phylo	nodelabel.phylo
make.bm.relaxed	geiger-internal
make.gbm	make.gbm
mecca	mecca
medusa	medusa
mkn.lik	geiger-internal
name.check	name.check
nh.test	nh.test
node.leaves	geiger-defunct
node.sons	geiger-defunct
nodelabel.phylo	nodelabel.phylo
ouTree	geiger-defunct
PATHd8.phylo	geiger-internal
phy.anova	geiger-defunct
phy.manova	geiger-defunct
phylo.clades	nodelabel.phylo
phylo.lookup	nodelabel.phylo
plot.auteurMCMC	geiger-internal
plot.auteurMCMCMC	geiger-internal
plot.medusa	plot.medusa
plot.rjmcmc	geiger-internal
plot.rjmcmc.list	geiger-internal
plotDiversificationSurface	geiger-internal
pool.rjmcmcsamples	geiger-defunct
pp.mcmc	pp.mcmc
primates	geiger-data
print.auteurRAW	geiger-internal
print.bayesfactor	geiger-internal
print.bm	geiger-internal
print.constraint.m	geiger-internal
print.glnL	geiger-internal
print.gprior	geiger-internal
print.mcmc.list	geiger-internal
print.medusa	medusa
print.mkn	geiger-internal
print.rbm	geiger-internal
print.rjmcmc	geiger-internal
print.rjmcmcmc	geiger-internal
print.taxdump	geiger-internal
print.transformer	geiger-internal
prune.extinct.taxa	geiger-defunct
prune.random.taxa	geiger-defunct
r8s.phylo	r8s.phylo
rate.estimate	geiger-defunct
ratematrix	ratematrix
rc	rc
rescale.phylo	rescale.phylo
rescaleTree	geiger-defunct
resplitEdgeMatrixGeiger	geiger-internal
rjmcmc.bm	rjmcmc.bm
root.phylo	geiger-internal
runMedusa	geiger-defunct
sem	geiger-internal
shifts.plot	geiger-defunct
sim.bd	sim.bd
sim.bdtree	sim.bdtree
sim.char	sim.char
sim.mecca	geiger-internal
span.phylo	geiger-internal
speciationalTree	geiger-defunct
splitEdgeMatrixGeiger	geiger-internal
startingpt.mecca	startingpt.mecca
stem.limits	bd.ms
stem.p	bd.ms
subset.phylo	subset.phylo
tip.disparity	geiger-defunct
tips	tips
to.auteur	to.auteur
to.coda	to.auteur
tracer	geiger-defunct
transform.phylo	geiger-defunct
treedata	treedata
tworateTree	geiger-defunct
ultrametricize.phylo	geiger-internal
unique.phylo	geiger-internal
uniqueMultiPhylo	geiger-internal
vmat	geiger-defunct
whales	geiger-data
white.mkn	geiger-internal
write.pathd8	geiger-internal
write.r8s	geiger-internal
write.treePL	geiger-internal
