\documentclass{article}[11pt]
\usepackage{Sweave}
\addtolength{\textwidth}{1in}
\addtolength{\oddsidemargin}{-.5in}
\setlength{\evensidemargin}{\oddsidemargin}
%\VignetteIndexEntry{Other vignettes}

\title{Other Vignettes}
\author{Terry Therneau}

\begin{document}
\maketitle

Many of the vignettes have been moved to a separate survivalVignettes package.
There are two primary reasons. 
One is that the survival package is becoming physically large,
and it was useful to split these off for maintainance purposes.
(The package is already an exception to CRAN policies on maximal size.)
A second is that as a recommended package survival cannot
depend on any packages outside of  base + recommended.  
(A minimally sufficient set that is self contained
is important for R maintainance and validation.)
This means that we cannot use more modern tools such as knitR or markdown,
refer to other packages such as splines, mstate or ggsurvfit, nor
use data from some of those packages in our examples.
 
The following vignettes are found in this other location
\begin{enumerate}
   \item external: A long discussion and examples focused on the external
     validation of a survival model.
   \item pseudo: Use of pseudovalues and the pseudo function.
   \item ridge: Addresses a recurrent question wrt using the ridge()
     function with a large number of covariates.
   \item royston: A small note that describes the data sets used in an
     excellent paper on validation, and how those data were incorporated into
     the survival package. (Royston and Altman, doi:10.1186/1471-2288-13-33)
   \item tutorial: This works through the examples found in the excellent
     tutorial by H. Putter, M. Fiocco and R. Geskus, 
     Tutorial in biostatistics: competing risks and multi-state models,
     Statistics in Medicine, 2006 (doi:10.1002/sim.2712).
   \item sas: An expanded discussion answering some repeated queries about 
     how survival package results differ from SAS.  Some of these computations
     take a very long time to run.
   \item shared: Use of shared coefficients and/or shared baseline hazards in
     multistate models.
   \item timedep: Time dependent covariates and time dependent coefficients.
\end{enumerate}

Over time, we expect more vignettes to transfer from the survival package,
and new ones to be written and added.  
\end{document}


