* using log directory 'd:/Rcompile/CRANpkg/local/4.4/SPACO.Rcheck'
* using R version 4.4.3 Patched (2026-02-12 r89426 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'SPACO/DESCRIPTION' ... OK
* this is package 'SPACO' version '1.0.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'SPACO' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 13.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [9s] OK
* checking whether the package can be loaded with stated dependencies ... [8s] OK
* checking whether the package can be unloaded cleanly ... [9s] OK
* checking whether the namespace can be loaded with stated dependencies ... [8s] OK
* checking whether the namespace can be unloaded cleanly ... [10s] OK
* checking loading without being on the library search path ... [10s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [20s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compiled code ... OK
* checking examples ... NONE
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [12s] ERROR
  Running 'testthat.R' [12s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
  > # * https://testthat.r-lib.org/articles/special-files.html
  > 
  > library(testthat)
  > library(SPACO)
  > 
  > test_check("SPACO")
  Saving _problems/test-SCA-28.R
  Saving _problems/test-SCA-35.R
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 4 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-SCA.R:28:3'): spaco works ────────────────────────────────────
  Expected `test$score` to equal `test_Matrix$score`.
  Differences:
       actual  | expected     
   [1] 0.37084 - 0.07491  [1] 
   [2] 0.29284 - 0.11308  [2] 
   [3] 0.17579 - 0.04778  [3] 
   [4] 0.12914 - 0.12844  [4] 
   [5] 0.06133 - 0.00429  [5] 
   [6] 0.42981 - 0.18399  [6] 
   [7] 0.11231 - 0.01420  [7] 
   [8] 0.21947 - 0.14135  [8] 
   [9] 0.13302 - 0.00626  [9] 
  [10] 0.12771 - 0.08099  [10]
  
  ── Failure ('test-SCA.R:35:3'): spaco works ────────────────────────────────────
  Expected `test_more$score` to equal `test_more_Matrix$score`.
  Differences:
       actual | expected     
   [1] 0.3904 - 0.2235   [1] 
   [2] 0.2142 - 0.0234   [2] 
   [3] 0.0023 - 0.0000   [3] 
   [4] 0.3527 - 0.2394   [4] 
   [5] 0.2753 - 0.1968   [5] 
   [6] 0.6234 - 0.4268   [6] 
   [7] 0.1129 - 0.0573   [7] 
   [8] 0.2364 - 0.1091   [8] 
   [9] 0.2359 - 0.1553   [9] 
  [10] 0.0594 - 0.0164   [10]
  
  
  [ FAIL 2 | WARN 0 | SKIP 0 | PASS 4 ]
  Error:
  ! Test failures.
  Execution halted
* checking PDF version of manual ... [17s] OK
* checking HTML version of manual ... [2s] OK
* DONE
Status: 1 ERROR