* using log directory 'd:/Rcompile/CRANpkg/local/4.5/lme4.Rcheck'
* using R version 4.5.3 (2026-03-11 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'lme4/DESCRIPTION' ... OK
* this is package 'lme4' version '2.0-1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'lme4' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 14.3.0'
* checking installed package size ... INFO
  installed size is  7.0Mb
  sub-directories of 1Mb or more:
    R          1.6Mb
    doc        1.7Mb
    libs       1.3Mb
    testdata   1.4Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [4s] OK
* checking whether the package can be loaded with stated dependencies ... [3s] OK
* checking whether the package can be unloaded cleanly ... [3s] OK
* checking whether the namespace can be loaded with stated dependencies ... [3s] OK
* checking whether the namespace can be unloaded cleanly ... [4s] OK
* checking loading without being on the library search path ... [3s] OK
* checking whether startup messages can be suppressed ... [3s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [45s] OK
* checking Rd files ... [5s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [1s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compiled code ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [60s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [296s] ERROR
  Running 'AAAtest-all.R' [176s]
  Running 'HSAURtrees.R' [0s]
  Running 'REMLdev.R' [3s]
  Running 'ST.R' [3s]
  Running 'agridat_gotway.R' [0s]
  Running 'bootMer.R' [0s]
  Running 'boundary.R' [1s]
  Running 'confint.R' [3s]
  Running 'devCritFun.R' [0s]
  Running 'drop.R' [0s]
  Running 'drop1contrasts.R' [0s]
  Running 'dynload.R' [1s]
  Running 'elston.R' [0s]
  Running 'evalCall.R' [0s]
  Running 'extras.R' [3s]
  Running 'falsezero_dorie.R' [0s]
  Running 'fewlevels.R' [0s]
  Running 'getME.R' [0s]
  Running 'glmer-1.R' [3s]
  Running 'glmerControlPass.R' [0s]
  Running 'glmerWarn.R' [0s]
  Running 'glmmExt.R' [3s]
  Running 'glmmWeights.R' [0s]
  Running 'hatvalues.R' [0s]
  Running 'is.R' [0s]
  Running 'lmList-tst.R' [4s]
  Running 'lme4_nlme.R' [3s]
  Running 'lmer-0.R' [3s]
  Running 'lmer-1.R' [3s]
  Running 'lmer-conv.R' [3s]
  Running 'lmer2_ex.R' [3s]
  Running 'methods.R' [0s]
  Running 'minval.R' [3s]
  Running 'modFormula.R' [0s]
  Running 'nbinom.R' [0s]
  Running 'nlmer-conv.R' [3s]
  Running 'nlmer.R' [3s]
  Running 'offset.R' [3s]
  Running 'optimizer.R' [3s]
  Running 'polytomous.R' [3s]
  Running 'prLogistic.R' [3s]
  Running 'predict_basis.R' [4s]
  Running 'predsim.R' [3s]
  Running 'priorWeights.R' [0s]
  Running 'priorWeightsModComp.R' [3s]
  Running 'profile-tst.R' [3s]
  Running 'refit.R' [3s]
  Running 'resids.R' [3s]
  Running 'respiratory.R' [3s]
  Running 'simulate.R' [3s]
  Running 'test-glmernbref.R' [5s]
  Running 'testOptControl.R' [4s]
  Running 'testcolonizer.R' [3s]
  Running 'testcrab.R' [3s]
  Running 'throw.R' [3s]
  Running 'varcorr.R' [3s]
  Running 'vcov-etc.R' [4s]
Running the tests in 'tests/AAAtest-all.R' failed.
Complete output:
  > if (base::require("testthat", quietly = TRUE)) {
  +     pkg   <- "lme4"
  +     require(pkg, character.only=TRUE, quietly=TRUE)
  +     if(getRversion() < "3.5.0") { withAutoprint <- identity ; prt <- print } else { prt <- identity }
  +     if(Sys.getenv("USER") %in% c("maechler", "bbolker")) withAutoprint({
  +         ## for developers' sake:
  +         lP <- .libPaths() # ---- .libPaths() : ----
  +         prt(lP)
  +         ## ---- Entries in .libPaths()[1] : ----
  +         prt(list.files(lP[1], include.dirs=TRUE))
  +         prt(sessionInfo())
  +         prt(packageDescription("Matrix"))
  +         ## 'lme4' from packageDescription "file" :
  +         prt(attr(packageDescription("lme4"), "file"))
  +     })
  +     test_check(pkg)
  +     ##======== ^^^
  +     print(warnings()) # TODO? catch most of these by expect_warning(..)
  + } else {
  +     cat( "package 'testthat' not available, cannot run unit tests\n" )
  + }
  Saving _problems/test-resids-82.R
  [ FAIL 1 | WARN 0 | SKIP 8 | PASS 1763 ]
  
  ══ Skipped tests (8) ═══════════════════════════════════════════════════════════
  • On CRAN (1): 'test-eval.R:2:1'
  • On Windows (1): 'test-methods.R:345:3'
  • Skipping (1): 'test-covariance_nlmer.R:22:3'
  • empty test (3): , ,
  • getRversion() < "4.6.0" is TRUE (1): 'test-methods.R:899:3'
  • testLevel < 2 is TRUE (1): 'test-predict.R:689:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-resids.R:81:5'): weighted residuals ──────────────────────────
  Expected `head(weighted.residuals(gm1), 3)` to equal `structure(...)`.
  Differences:
  2/3 mismatches (average diff: 0.267)
  [2] -5.17 - -4.93 == -0.244
  [3] -5.65 - -5.35 == -0.291
  
  [ FAIL 1 | WARN 0 | SKIP 8 | PASS 1763 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [282s] OK
* checking PDF version of manual ... [27s] OK
* checking HTML version of manual ... [26s] OK
* DONE
Status: 1 ERROR