c58b9f9b4ff9720787b801df69335ab6 *DESCRIPTION
1435a60352d7034137d71221e03c8c40 *NAMESPACE
b13d5dfefef2f64e7dd6fe96830d9d32 *R/GenerateQ.matrices.r
c0c76dfdd764881cac30b9cebe506f11 *R/data_morpho.R
3c2fc7a393a7a4d893eeb387d10bfb02 *R/morpho.R
922869266b0110648963dcc2780f8306 *R/plot.morpho.R
60f9a81d9213324c1576f045faa931e3 *R/plotMorphoGrid.R
e9b9b8165c497297c48e7259d9b8490d *R/reconstruct.tree.R
86bd81a2ebe40424b0e07be0ef8ef815 *R/sim.missing.data.R
1f763d92bcd7498a30df81b1af3bc925 *R/sim.morpho.R
88c074ef13ea9b1d7ea232cb760846f7 *R/summary.r
54abb785cd45e4cfa13d59d20d70afc6 *R/write.r
b0d50aab1ce0f44c38212348c027235c *README.md
fbc1572c01089dfe9782c84147bf9072 *build/vignette.rds
1e7839e645a1b86bf0ef504534646b17 *data/morpho_data.rda
8167957bfbc2b034b587291b314178b4 *inst/CITATION
7b3789b5d47b2ad6360b64678ee4f1dc *inst/doc/introduction.R
091b2c4436cb88dc3ade4b0adcc4fa49 *inst/doc/introduction.Rmd
8f58e492811c5e651d0a950c540df532 *inst/doc/introduction.html
19bba7a3af6d2c39da318c3e60baf76e *inst/test_scripts/MkG.R
a6e9363780d95e8d8019adf446e277ba *inst/test_scripts/fossil.R
6f96bea51efc726f7c818cd2666f39fd *inst/test_scripts/make.evol.R
b2e4aef9bda57b583bc1d25aaa8d012f *inst/test_scripts/matrix.R
6b1392c6cae5eb33525b510e38d6a8e4 *inst/test_scripts/plot.evol.R
89a90f006892f0cbdec8b38da32bbc9c *inst/test_scripts/plot.morpho.grid.R
76ae883560b774d7ce9046bd35ea8264 *inst/test_scripts/plot_rate_variation.R
0b8a580c294fe86f96c1dc422babf35f *inst/test_scripts/sim.morpho.process.R
3efcb33835e21ac1d17842a44d6cfb1e *inst/test_scripts/sim.sim2.R
9de6ade118489f182efbc336791fbfe9 *inst/test_scripts/sim.site.R
2ebb459ab56cbf906791615c584fb3ee *inst/test_scripts/sim.test.R
6fb68528d75f3d7183ab0d10b03b5544 *inst/test_scripts/tmp.R
e548548fe1cb72f61193e260333d49ad *man/combine.morpho.Rd
7736216d628296fab39145cfdb39bad1 *man/convergent_evol.Rd
6bed4e7178dd0bd0992ffa72ab922939 *man/find_path_to_tip.Rd
0113c5e0c947687c64cbffed6888542a *man/get.convergent.Rd
cf5a547920e5fc6f80e74fa11da621b1 *man/get.matrix.Rd
6ac2673261e3a1fa57ecab995eb1988b *man/get.reconstructed.Rd
b1248df3db665b8a31a87e7aa634d631 *man/get.transitions.Rd
89d048dcf90055a7e39a76812320a094 *man/get_gamma_rates.Rd
6980fea72fa305117a9c090a291539bd *man/get_lognormal_rates.Rd
eda1940687f035256656f0ce7bbde642 *man/morpho.Rd
10b63c646a90d81422948855d38caa38 *man/morpho_data.Rd
f44b0d5d8be1cfa32d329e741969425f *man/morphsim_fossilsim.Rd
0a7816ad62e01e8aefc408e61987b630 *man/plot.morpho.Rd
71ceeef037d2fd1b30f444ed133d2291 *man/plotMorphoGrid.Rd
0cb4d24b179f00a9b53ed086883acecd *man/reconstruct.matrix.Rd
7cd4348488ff72d9f9099ed34721ad18 *man/reconstruct.tree.Rd
f77203a22b9a9bb3890df052359e553f *man/sim.missing.data.Rd
c2116b5570148d6e49161928dd881ff5 *man/sim.morpho.Rd
22581a36b05074c2593a04d0d936218f *man/stats.morpho.Rd
645194942985e7649bbe692cf3fca75e *man/symmetric.Q.matrix.Rd
5d4ca9aeb6592ad01c6d0c2375239fce *man/write.morpho.Rd
2f8042acd5d93c04fe3aea90e166f876 *man/write.recon.matrix.Rd
aa55a06e1f85a0400ef5f9377c5bc57e *man/write.recon.tree.Rd
c7a860fb5de1f6fe44a87ecb58ddd5f5 *man/write.recon.tsv.Rd
af324bfca100ce90f5877801ccfa6646 *man/write.tsv.Rd
bc2567f783c704152d61f27263242c5c *tests/testthat.R
7a3e4a6ba4f079660072fb766ea2e750 *tests/testthat/test-morphsim.R
091b2c4436cb88dc3ade4b0adcc4fa49 *vignettes/introduction.Rmd
