# seqmagick 0.1.9

+ `fa_summary()` to summarize sequences (count, length range, GC content and ambiguous character proportion) (2026-08-27, Thu)
+ `fa_read()` and `fa_write()` support compressed files (.gz, .bz2, .xz) transparently (2026-08-27, Thu)
+ add testthat test suite covering reading/writing, format conversions, renaming and summaries (2026-08-27, Thu)
+ remove 'magrittr' dependency, use base pipe (`|>`) (2026-08-27, Thu)
+ `bs_rename()` and `fa_rename()` default to `sep=NULL` and `position=NULL`; unmatched names are kept unchanged (2026-08-27, Thu)
+ bug fix: keep original names for unmatched entries when both `sep` and `position` are set (2026-08-27, Thu)

# seqmagick 0.1.8

+ `ncbi_fa_read()` to download FASTA sequences by accession number and read them as sequence objects (2026-01-31, Sat)

# seqmagick 0.1.7

+ `clw_read()` and `sth_read()` to parse CLUSTAL and STOCKHOLM outputs (2023-12-19, Tue)
+ `mega_read()` to parse various file types of MEGA sequence alignment (2023-12-18, Mon)

# seqmagick 0.1.6

+ `gb_read()` to parse 'GenBank' file (2023-06-27, Tue)

# seqmagick 0.1.2

+ move muscle, GenomicAlignments, GenomicRanges, IRanges and Rsamtools from Imports to Suggests (2019-12-18, Wed)

# seqmagick 0.1.1

+ cran initial release (2019-12-17, Tue)

# seqmagick 0.0.9

+ add examples to function documentation (2019-12-11, Wed)
+ change default `type="auto"` for `fa_read` (2019-12-09, Mon)

# seqmagick 0.0.8

+ submit to CRAN (2019-12-03, Tue)

# seqmagick 0.0.7

+ bam2DNAStringSet function (2016-12-28, Wed)

# seqmagick 0.0.6

+ fix phy_read bug for sequential format (2016-12-14, Wed)

# seqmagick 0.0.5

+ replaceInside (2016-09-26, Mon)
+ download_genbank to download sequences from GenBank by accession number (2016-07-28, Thu)

# seqmagick 0.0.4

+ fa_rename & bs_rename (2016-07-22, Fri)

# seqmagick 0.0.3

+ phy_write, phy_read, fas2phy, phy2fas (2016-06-28, Tue)

# seqmagick 0.0.2

+ add vignette (2016-06-20, Mon)
+ bs_aln: sequence alignment (2016-06-20, Mon)
+ bs_hamming: hamming distance of sequences (2016-06-15, Wed)
+ bs_filter: sequence filter for BStringSet object (2016-06-15, Wed)

# seqmagick 0.0.1

+ fa_read: read FASTA file (2016-06-15, Wed)
+ consensus: consensus sequence of aligned FASTA sequences (2016-06-15, Wed)
+ fa_to_interleaved & fa_to_sequential: FASTA format conversion (2016-06-15, Wed)
+ fa_combine: combine 2 FASTA files (2016-06-15, Wed)
+ fa_filter: fasta filter (2016-06-09, Thu)
+ fa_write: output fasta file to interleaved or sequential format (2016-06-09, Thu)
