Last updated on 2026-09-06 08:51:39 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.1 | 13.53 | 302.51 | 316.04 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.1 | 10.21 | 263.95 | 274.16 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.1 | 12.00 | 167.98 | 179.98 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.1 | 13.00 | 210.82 | 223.82 | OK | |
| r-devel-windows-x86_64 | 1.1.1 | 17.00 | 423.00 | 440.00 | OK | |
| r-patched-linux-x86_64 | 1.1.1 | 18.10 | 339.58 | 357.68 | OK | |
| r-release-linux-x86_64 | 1.1.1 | 13.85 | 313.79 | 327.64 | OK | |
| r-release-macos-arm64 | 1.1.1 | 3.00 | 88.00 | 91.00 | OK | |
| r-release-macos-x86_64 | 1.1.1 | 10.00 | 329.00 | 339.00 | OK | |
| r-release-windows-x86_64 | 1.1.1 | 17.00 | 414.00 | 431.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.1 | 3.00 | 82.00 | 85.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.1 | 10.00 | 528.00 | 538.00 | OK | |
| r-oldrel-windows-x86_64 | 1.1.1 | 20.00 | 210.00 | 230.00 | ERROR |
Version: 1.1.1
Check: tests
Result: ERROR
Running 'testthat.R' [83s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(BayesianFitForecast)
>
> test_check("BayesianFitForecast")
Option file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata/option.R
Excel file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata/SanFrancisco.xlsx
Output path: D:\temp\2026_09_03_01_02_10_20122\Rtmp8uT8zP
Loading required package: StanHeaders
rstan version 2.32.7 (Stan version 2.39.0)
For execution on a local, multicore CPU with excess RAM we recommend calling
options(mc.cores = parallel::detectCores()).
To avoid recompilation of unchanged Stan programs, we recommend calling
rstan_options(auto_write = TRUE)
For within-chain threading using `reduce_sum()` or `map_rect()` Stan functions,
change `threads_per_chain` option:
rstan_options(threads_per_chain = 1)
Do not specify '-march=native' in 'LOCAL_CPPFLAGS' or a Makevars file
make cmd is
make -f "D:/RCompile/recent/R-4.5.3/etc/x64/Makeconf" -f "D:/RCompile/recent/R-4.5.3/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file7cd864525b68.dll" WIN=64 TCLBIN= OBJECTS="file7cd864525b68.o"
make would use
make[1]: Entering directory '/d/temp/2026_09_03_01_02_10_20122/Rtmp8uT8zP'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.5/Rcpp/include/" -I"D:/temp/2026_09_03_01_02_10_20122/RtmpEZMNee/RLIBS_171d85d5b1db8/RcppEigen/include/" -I"D:/temp/2026_09_03_01_02_10_20122/RtmpEZMNee/RLIBS_171d85d5b1db8/RcppEigen/include/unsupported" -I"D:/temp/2026_09_03_01_02_10_20122/RtmpEZMNee/RLIBS_171d85d5b1db8/BH/include" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -DTBB_INTERFACE_NEW -ID:/RCompile/CRANpkg/lib/4.5/RcppParallel/include -I"D:/RCompile/CRANpkg/lib/4.5/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.5/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file7cd864525b68.cpp -o file7cd864525b68.o
if test "zfile7cd864525b68.o" != "z"; then \
if test -e "file7cd864525b68-win.def"; then \
echo g++ -shared -s -static-libgcc -o file7cd864525b68.dll file7cd864525b68-win.def file7cd864525b68.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file7cd864525b68.dll file7cd864525b68-win.def file7cd864525b68.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
else \
echo EXPORTS > tmp.def; \
nm file7cd864525b68.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \
echo g++ -shared -s -static-libgcc -o file7cd864525b68.dll tmp.def file7cd864525b68.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
g++ -shared -s -static-libgcc -o file7cd864525b68.dll tmp.def file7cd864525b68.o "D:/RCompile/CRANpkg/lib/4.5/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.5/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64" -ltbb -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R-4.5.3/bin/x64" -lR ; \
rm -f tmp.def; \
fi \
fi
make[1]: Leaving directory '/d/temp/2026_09_03_01_02_10_20122/Rtmp8uT8zP'
Saving _problems/test-Run_MCMC-27.R
Data file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata
Option file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata/option.R
Excel file path: D:/RCompile/CRANpkg/lib/4.5/BayesianFitForecast/extdata/SanFrancisco.xlsx
Output path: D:\temp\2026_09_03_01_02_10_20122\Rtmp8uT8zP
This is bayesplot version 1.16.0
- Online documentation and vignettes at mc-stan.org/bayesplot
- bayesplot theme set to bayesplot::theme_default()
* Does _not_ affect other ggplot2 plots
* See ?bayesplot_theme_set for details on theme setting
Loaded file: D:\RCompile\CRANpkg\lib\4.5\BayesianFitForecast\extdata/Bayesian-uniform-cal-17-fcst-0-poisson-sanfrancisco-fit.Rdata
No time-dependent templates provided — skipping time-dependent plots.
[ FAIL 1 | WARN 6 | SKIP 0 | PASS 8 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-Run_MCMC.R:25:5'): Run_MCMC works with example files ───────────
Error in `sink(type = "output")`: invalid connection
Backtrace:
▆
1. ├─base::eval(...)
2. │ └─base::eval(...)
3. │ ├─testthat::expect_no_error(Run_MCMC(option_file, excel_file, output_path)) at test-Run_MCMC.R:25:5
4. │ │ └─testthat:::expect_no_(...)
5. │ │ └─testthat:::quasi_capture(enquo(object), NULL, capture)
6. │ │ ├─testthat (local) .capture(...)
7. │ │ │ ├─base::withRestarts(...)
8. │ │ │ │ └─base (local) withOneRestart(expr, restarts[[1L]])
9. │ │ │ │ └─base (local) doWithOneRestart(return(expr), restart)
10. │ │ │ └─base::withCallingHandlers(...)
11. │ │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
12. │ └─BayesianFitForecast::Run_MCMC(option_file, excel_file, output_path)
13. │ ├─base::tryCatch(...)
14. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
15. │ └─base::source(temp_file, local = FALSE)
16. │ ├─base::withVisible(eval(ei, envir))
17. │ └─base::eval(ei, envir)
18. │ └─base::eval(ei, envir)
19. └─rstan::stan_model(file.path(output_path, "ode_model.stan"))
20. └─rstan:::cxxfunctionplus(...)
21. └─base::sink(type = "output")
[ FAIL 1 | WARN 6 | SKIP 0 | PASS 8 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64