Last updated on 2026-09-06 08:51:57 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.10.3 | 3.54 | 47.17 | 50.71 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.10.3 | 2.84 | 30.75 | 33.59 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.10.3 | 34.70 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.10.3 | 41.86 | OK | |||
| r-devel-windows-x86_64 | 1.10.3 | 6.00 | 81.00 | 87.00 | OK | |
| r-patched-linux-x86_64 | 1.10.3 | 2.80 | 43.73 | 46.53 | OK | |
| r-release-linux-x86_64 | 1.10.3 | 4.03 | 38.07 | 42.10 | ERROR | |
| r-release-macos-arm64 | 1.10.3 | 1.00 | 22.00 | 23.00 | ERROR | |
| r-release-macos-x86_64 | 1.10.3 | 3.00 | 76.00 | 79.00 | OK | |
| r-release-windows-x86_64 | 1.10.3 | 5.00 | 79.00 | 84.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.10.3 | 1.00 | 30.00 | 31.00 | OK | |
| r-oldrel-macos-x86_64 | 1.10.3 | 3.00 | 145.00 | 148.00 | OK | |
| r-oldrel-windows-x86_64 | 1.10.3 | 7.00 | 92.00 | 99.00 | OK |
Version: 1.10.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘get_started_with_TCGAretriever.Rmd’ using rmarkdown
Error in .Call(R_curl_fetch_memory, enc2utf8(url), handle, nonblocking) :
reached elapsed time limit
Quitting from get_started_with_TCGAretriever.Rmd:47-55 [unnamed-chunk-1]
Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64
Version: 1.10.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘get_started_with_TCGAretriever.Rmd’ using rmarkdown
Error in .Call(R_curl_fetch_memory, enc2utf8(url), handle, nonblocking) :
reached elapsed time limit
Quitting from get_started_with_TCGAretriever.Rmd:47-55 [unnamed-chunk-1]
Execution halted
Flavor: r-release-macos-arm64
Version: 1.10.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'get_started_with_TCGAretriever.Rmd' using rmarkdown
Quitting from get_started_with_TCGAretriever.Rmd:120-135 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `order()`:
! argument 1 is not a vector
---
Backtrace:
▆
1. └─TCGAretriever::get_molecular_data(...)
2. └─TCGAretriever::get_gene_identifiers()
3. ├─OUT[order(OUT$type), ]
4. ├─base::`[.data.frame`(OUT, order(OUT$type), )
5. └─base::order(OUT$type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'get_started_with_TCGAretriever.Rmd' failed with diagnostics:
argument 1 is not a vector
--- failed re-building 'get_started_with_TCGAretriever.Rmd'
SUMMARY: processing the following file failed:
'get_started_with_TCGAretriever.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-windows-x86_64