Last updated on 2026-06-08 08:53:27 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.7.2 | 9.60 | 432.22 | 441.82 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.7.2 | 6.85 | 295.23 | 302.08 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.7.2 | 15.00 | 692.64 | 707.64 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.7.2 | 15.00 | 794.26 | 809.26 | OK | |
| r-devel-windows-x86_64 | 0.7.2 | 13.00 | 456.00 | 469.00 | OK | |
| r-patched-linux-x86_64 | 0.7.2 | 8.75 | 412.88 | 421.63 | OK | |
| r-release-linux-x86_64 | 0.7.2 | 7.48 | 408.98 | 416.46 | OK | |
| r-release-macos-arm64 | 0.7.2 | 2.00 | 156.00 | 158.00 | OK | |
| r-release-macos-x86_64 | 0.7.2 | 6.00 | 618.00 | 624.00 | OK | |
| r-release-windows-x86_64 | 0.7.2 | 13.00 | 448.00 | 461.00 | OK | |
| r-oldrel-macos-arm64 | 0.7.2 | OK | ||||
| r-oldrel-macos-x86_64 | 0.7.2 | 6.00 | 475.00 | 481.00 | OK | |
| r-oldrel-windows-x86_64 | 0.7.2 | 15.00 | 596.00 | 611.00 | OK |
Version: 0.7.2
Check: examples
Result: ERROR
Running examples in ‘fusen-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: inflate_all
> ### Title: Inflate all your flat files
> ### Aliases: inflate_all inflate_all_no_check
>
> ### ** Examples
>
> ## Not run:
> ##D # Usually, in the current package run inflate_all() directly
> ##D # These functions change the current user workspace
> ##D inflate_all()
> ##D # Or inflate_all_no_check() to prevent checks to run
> ##D inflate_all_no_check()
> ##D # Or inflate with the styler you want
> ##D inflate_all(stylers = styler::style_pkg)
> ## End(Not run)
>
> # You can also inflate_all flats of another package as follows
> # Example with a dummy package with a flat file
> dummypackage <- tempfile("inflateall.otherpkg")
> dir.create(dummypackage)
> fill_description(pkg = dummypackage, fields = list(Title = "Dummy Package"))
> flat_files <- add_minimal_package(
+ pkg = dummypackage,
+ overwrite = TRUE,
+ open = FALSE
+ )
Created file .here in /tmp/RtmpgNbHNW/inflateall.otherpkg10f6ba1e906c9c . Please start a new R session in the new project directory.
> flat_file <- flat_files[grep("flat", basename(flat_files))]
> # Inflate the flat file once
> usethis::with_project(dummypackage, {
+ # if you are starting from a brand new package, inflate_all() will crash
+ # it's because of the absence of a fusen config file
+ #
+ # inflate_all() # will crash
+
+ # Add licence
+ usethis::use_mit_license("John Doe")
+
+ # you need to inflate manually your flat file first
+ inflate(
+ pkg = dummypackage,
+ flat_file = flat_file,
+ vignette_name = "Get started",
+ check = FALSE,
+ open_vignette = FALSE,
+ document = TRUE,
+ overwrite = "yes"
+ )
+
+ # your config file has been created
+ config_yml_ref <-
+ yaml::read_yaml(getOption("fusen.config_file", default = "dev/config_fusen.yaml"))
+ })
✔ Setting active project to
"/tmp/RtmpgNbHNW/inflateall.otherpkg10f6ba1e906c9c".
✔ Adding "MIT + file LICENSE" to 'License'.
✔ Writing 'LICENSE'.
✔ Writing 'LICENSE.md'.
✔ Adding "^LICENSE\\.md$" to '.Rbuildignore'.
ℹ Loading inflateall.otherpkg10f6ba1e906c9c
Writing 'NAMESPACE'
✔ Adding knitr to 'Suggests' field in DESCRIPTION.
☐ Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
☐ Then directly refer to functions with `knitr::fun()`.
✔ Adding "inst/doc" to '.gitignore'.
── config file for dev/flat_minimal.Rmd ────────────────────────────────────────
✔ R: R/my_fun.R was added to the config file
✔ tests: tests/testthat/test-my_fun.R was added to the config file
✔ vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating inflateall.otherpkg10f6ba1e906c9c documentation
ℹ Loading inflateall.otherpkg10f6ba1e906c9c
Writing 'NAMESPACE'
Writing 'my_fun.Rd'
ℹ Loading inflateall.otherpkg10f6ba1e906c9c
[+] 2 package(s) added: rmarkdown, testthat.
✔ Setting active project to "/tmp/RtmpgNbHNW/dummy.package10f6ba69627313".
>
> # Next time, you can run inflate_all() directly
> usethis::with_project(dummypackage, {
+ # now you can run inflate_all()
+ inflate_all(check = FALSE, document = TRUE)
+ })
✔ Setting active project to
"/tmp/RtmpgNbHNW/inflateall.otherpkg10f6ba1e906c9c".
✔ The flat file flat_minimal.Rmd is going to be inflated
── config file for dev/flat_minimal.Rmd ────────────────────────────────────────
── check not registered files ──────────────────────────────────────────────────
✔ There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.otherpkg10f6ba1e906c9c documentation
ℹ Loading inflateall.otherpkg10f6ba1e906c9c
Writing 'NAMESPACE'
ℹ Loading inflateall.otherpkg10f6ba1e906c9c
✔ Setting active project to "/tmp/RtmpgNbHNW/dummy.package10f6ba69627313".
>
> # If you wish, the code coverage can be computed
> usethis::with_project(dummypackage, {
+ # now you can run inflate_all()
+ inflate_all(check = FALSE, document = TRUE, codecov = TRUE)
+ })
✔ Setting active project to
"/tmp/RtmpgNbHNW/inflateall.otherpkg10f6ba1e906c9c".
✔ The flat file flat_minimal.Rmd is going to be inflated
── config file for dev/flat_minimal.Rmd ────────────────────────────────────────
── check not registered files ──────────────────────────────────────────────────
✔ There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.otherpkg10f6ba1e906c9c documentation
ℹ Loading inflateall.otherpkg10f6ba1e906c9c
Writing 'NAMESPACE'
ℹ Loading inflateall.otherpkg10f6ba1e906c9c
ℹ Computing code coverage - it might take some time
Error in covr::package_coverage() : Package installation did not succeed.
Calls: <Anonymous> ... inflate_all -> compute_codecov -> print -> <Anonymous>
✔ Setting active project to "/tmp/RtmpgNbHNW/dummy.package10f6ba69627313".
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.7.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [219s/294s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(fusen)
>
> test_check("fusen")
Created file .here in /tmp/RtmptB1DWc/add.flat.template1116f62bf4685b . Please start a new R session in the new project directory.
'0-dev_history.Rmd' already exists. It was not overwritten. Set `add_flat_template(overwrite = TRUE)` if you want to do so.
Created file .here in /tmp/RtmptB1DWc/dev.history.template1116f615dbe8e0 . Please start a new R session in the new project directory.
v Setting active project to
"/tmp/RtmptB1DWc/dev.history.template1116f615dbe8e0".
! Title was modified to 'Title Case'.
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Setting active project to "<no active project>".
Created file .here in /tmp/RtmptB1DWc/dev.history.template.uu1116f62b39bbe5 . Please start a new R session in the new project directory.
v Setting active project to
"/tmp/RtmptB1DWc/dev.history.template.uu1116f62b39bbe5".
! Title was modified to 'Title Case'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Setting active project to "<no active project>".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitfull1116f63003ebde".
v Setting active project to "<no active project>".
-- config file for dev/flat_full.Rmd -------------------------------------------
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitminimal.package1116f675a0b78b".
v Setting active project to "<no active project>".
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitminpkg1116f636cfc73a".
v Setting active project to "<no active project>".
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitminimal.flat1116f62a554edf".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Setting active project to "<no active project>".
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitminflat1116f636b87fa2".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Setting active project to "<no active project>".
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitadd1116f658516e93".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Setting active project to "<no active project>".
-- config file for dev/flat_additional.Rmd -------------------------------------
-- config file for dev/flat_additional.Rmd -------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitadditional1116f615929224".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Setting active project to "<no active project>".
-- config file for dev/flat_additional.Rmd -------------------------------------
-- config file for dev/flat_additional.Rmd -------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteach1116f64a2e376c".
v Setting active project to "<no active project>".
-- config file for dev/flat_teaching.Rmd ---------------------------------------
-- config file for dev/flat_teaching.Rmd ---------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "<no active project>".
-- config file for dev/flat_teaching.Rmd ---------------------------------------
-- config file for dev/flat_teaching.Rmd ---------------------------------------
Created file .here in /tmp/RtmptB1DWc/other.names1116f628888f64 . Please start a new R session in the new project directory.
v Setting active project to "/tmp/RtmptB1DWc/other.names1116f628888f64".
i Loading other.names1116f628888f64
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_hello_2.Rmd ----------------------------------------
v R: R/hello.R was added to the config file
v tests: tests/testthat/test-hello.R was added to the config file
v vignettes: vignettes/hello.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating other.names1116f628888f64 documentation
i Loading other.names1116f628888f64
Writing 'NAMESPACE'
Writing 'hello.Rd'
i Loading other.names1116f628888f64
[+] 2 package(s) added: rmarkdown, testthat.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
Created file .here in /tmp/RtmptB1DWc/devdir1116f61bc88f50 . Please start a new R session in the new project directory.
-- Creating new directory: /tmp/RtmptB1DWc/chunk.export.1116f6432c16e5/foosen --
v Creating '/tmp/RtmptB1DWc/chunk.export.1116f6432c16e5/foosen/'.
v Setting active project to
"/tmp/RtmptB1DWc/chunk.export.1116f6432c16e5/foosen".
v Creating 'R/'.
v Writing a sentinel file '.here'.
[ ] Build robust paths within your project via `here::here()`.
i Learn more at <https://here.r-lib.org>.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v New directory created: /tmp/RtmptB1DWc/chunk.export.1116f6432c16e5/foosen
v Added /tmp/RtmptB1DWc/chunk.export.1116f6432c16e5/foosen/dev/flat_minimal_package.Rmd, /tmp/RtmptB1DWc/chunk.export.1116f6432c16e5/foosen/dev/0-dev_history.Rmd
[1] "test without interactive"
-- Creating new directory: /tmp/RtmptB1DWc/chunk.noRd.1116f639250e3/foosen -----
v Creating '/tmp/RtmptB1DWc/chunk.noRd.1116f639250e3/foosen/'.
v Setting active project to "/tmp/RtmptB1DWc/chunk.noRd.1116f639250e3/foosen".
v Creating 'R/'.
v Writing a sentinel file '.here'.
[ ] Build robust paths within your project via `here::here()`.
i Learn more at <https://here.r-lib.org>.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v New directory created: /tmp/RtmptB1DWc/chunk.noRd.1116f639250e3/foosen
v Added /tmp/RtmptB1DWc/chunk.noRd.1116f639250e3/foosen/dev/flat_minimal_package.Rmd, /tmp/RtmptB1DWc/chunk.noRd.1116f639250e3/foosen/dev/0-dev_history.Rmd
[1] "test without interactive"
-- Creating new directory: /tmp/RtmptB1DWc/dummy1116f639bd74ba/foosen ----------
! The path: /tmp/RtmptB1DWc/dummy1116f639bd74ba/foosen already exists.
x Aborting fusen project creation. Set `create_fusen(overwrite = TRUE)` to avoid a stop.
! The path: /tmp/RtmptB1DWc/dummy1116f639bd74ba/foosen already exists.
v Added /tmp/RtmptB1DWc/dummy1116f639bd74ba/foosen/dev/flat_full.Rmd, /tmp/RtmptB1DWc/dummy1116f639bd74ba/foosen/dev/0-dev_history.Rmd
-- Creating new directory: /tmp/RtmptB1DWc/create.fusen.full1116f6123d34f4/tempf
-- Creating new directory: /tmp/RtmptB1DWc/create.fusen.minimal1116f64bbffb78/te
-- Creating new directory: /tmp/RtmptB1DWc/create.fusen.teaching1116f66604320c/t
-- Creating new directory: /tmp/RtmptB1DWc/create.fusen.dev_history1116f611c21a4
-- Creating new directory: /tmp/RtmptB1DWc/subdir/subdir2/dummy1116f61ed3ae43 --
-- Creating new directory: /tmp/RtmptB1DWc/dummygui1116f671016508 --------------
-- Creating new directory: /tmp/RtmptB1DWc/dummygui1116f65f29360c --------------
-- Creating new directory: /tmp/RtmptB1DWc/dummygui1116f65c9efe1d --------------
-- Creating new directory: /tmp/RtmptB1DWc/dummygui1116f67d40c94d --------------
-- Creating new directory: /tmp/RtmptB1DWc/dummy1116f63fd0e881/gigit -----------
-- Initializing git repository -------------------------------------------------
-- Creating new directory: /tmp/RtmptB1DWc/dummy1116f6209c2fd4/gigit -----------
-- Creating new directory: /tmp/RtmptB1DWc/dummygui1116f62f2114d7 --------------
-- Initializing git repository -------------------------------------------------
-- Creating new directory: /tmp/RtmptB1DWc/dummygui1116f6423477f4 --------------
v Setting active project to "/tmp/RtmptB1DWc/deprecate1116f6b008183".
-- config file for dev/flat_full.Rmd -------------------------------------------
v The flat file flat_full.Rmd has been deprecated.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
! Title was modified to 'Title Case'.
v Setting active project to "/tmp/RtmptB1DWc/drawpkg.structure1116f67d5bbb5f".
-- No NAMESPACE file found there: /tmp/RtmptB1DWc/drawpkg.structure1116f67d5bbb
-- keep ------------------------------------------------------------------------
-- config file for dev/flat_full.Rmd -------------------------------------------
-- Reading NAMESPACE file --------------------------------------------------------------------------
-- flat_full.Rmd -----------------------------------------------------------------------------------
-- keep --------------------------------------------------------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f675948d9d".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f675948d9d".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
Created file .here in /tmp/RtmptB1DWc/dummypackage.special1116f67b32ff16 . Please start a new R session in the new project directory.
v Setting active project to
"/tmp/RtmptB1DWc/dummypackage.special1116f67b32ff16".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f675948d9d".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f675948d9d".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f675948d9d".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f675948d9d".
-- config file for dev/flat_full.Rmd -------------------------------------------
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f675948d9d".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f675948d9d".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/clean.vignette1116f66a603091".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
Created file .here in /tmp/RtmptB1DWc/descpackage1116f637e5f9bf . Please start a new R session in the new project directory.
v Setting active project to "/tmp/RtmptB1DWc/descpackage1116f637e5f9bf".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
Created file .here in /tmp/RtmptB1DWc/nordpackage1116f6dbe387 . Please start a new R session in the new project directory.
v Setting active project to "/tmp/RtmptB1DWc/nordpackage1116f6dbe387".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
-- Creating new directory: /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/f
v Creating '/tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/full/'.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/full".
v Creating 'R/'.
v Writing a sentinel file '.here'.
[ ] Build robust paths within your project via `here::here()`.
i Learn more at <https://here.r-lib.org>.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v New directory created: /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/full
v Added /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/full/dev/flat_full.Rmd, /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/full/dev/0-dev_history.Rmd
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/full".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
-- Creating new directory: /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/m
v Creating '/tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/minimal/'.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/minimal".
v Creating 'R/'.
v Writing a sentinel file '.here'.
[ ] Build robust paths within your project via `here::here()`.
i Learn more at <https://here.r-lib.org>.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v New directory created: /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/minimal
v Added /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/minimal/dev/flat_minimal_package.Rmd, /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/minimal/dev/0-dev_history.Rmd
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/minimal".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
-- Creating new directory: /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/t
v Creating '/tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/teaching/'.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/teaching".
v Creating 'R/'.
v Writing a sentinel file '.here'.
[ ] Build robust paths within your project via `here::here()`.
i Learn more at <https://here.r-lib.org>.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v New directory created: /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/teaching
v Added /tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/teaching/dev/flat_teaching.Rmd
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.inflate1116f671a54f0d/teaching".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/dataset1116f67431e0fd".
v Adding R to 'Depends' field in DESCRIPTION.
v Creating 'data/'.
v Setting 'LazyData' to "true" in 'DESCRIPTION'.
v Saving "nyc_squirrels" to "data/nyc_squirrels.rda".
[ ] Document your data (see <https://r-pkgs.org/data.html>).
v Adding "GPL (>= 3)" to 'License'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/empty.chunks1116f661a5b888".
v Adding "GPL (>= 3)" to 'License'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Adding R to 'Depends' field in DESCRIPTION.
v Creating 'data/'.
v Setting 'LazyData' to "true" in 'DESCRIPTION'.
v Saving "cars" to "data/cars.rda".
[ ] Document your data (see <https://r-pkgs.org/data.html>).
-- config file for dev/flat_full.Rmd -------------------------------------------
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/r6class1116f6571bf0e8".
v Adding "GPL (>= 3)" to 'License'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Adding R to 'Depends' field in DESCRIPTION.
v Creating 'data/'.
v Setting 'LazyData' to "true" in 'DESCRIPTION'.
v Saving "cars" to "data/cars.rda".
[ ] Document your data (see <https://r-pkgs.org/data.html>).
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.deprecated1116f6d246b7d".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to
"/tmp/RtmptB1DWc/inflate.no.vignette1116f651228539".
i Loading inflate.no.vignette1116f651228539
Writing 'NAMESPACE'
-- config file for dev/flat_full.Rmd -------------------------------------------
v R: R/my_median.R was added to the config file
v R: R/my_other_median.R was added to the config file
v tests: tests/testthat/test-my_median.R was added to the config file
v tests: tests/testthat/test-my_other_median.R was added to the config file
Saving attachment parameters to yaml config file
Updating inflate.no.vignette1116f651228539 documentation
i Loading inflate.no.vignette1116f651228539
Writing 'NAMESPACE'
Writing 'my_median.Rd'
Writing 'my_other_median.Rd'
Writing 'sub_median.Rd'
i Loading inflate.no.vignette1116f651228539
[+] 2 package(s) added: stats, testthat.
! my_median.R has been overwritten
! my_other_median.R has been overwritten
! test-my_median.R has been overwritten
! test-my_other_median.R has been overwritten
-- config file for dev/flat_full.Rmd -------------------------------------------
i Some files group already existed and were modified: flat_full.Rmd
Documentation parameters were restored from attachment config file.
Updating inflate.no.vignette1116f651228539 documentation
i Loading inflate.no.vignette1116f651228539
Writing 'NAMESPACE'
i Loading inflate.no.vignette1116f651228539
! my_median.R has been overwritten
! my_other_median.R has been overwritten
! test-my_median.R has been overwritten
! test-my_other_median.R has been overwritten
-- config file for dev/flat_full.Rmd -------------------------------------------
i Some files group already existed and were modified: flat_full.Rmd
Documentation parameters were restored from attachment config file.
Updating inflate.no.vignette1116f651228539 documentation
i Loading inflate.no.vignette1116f651228539
Writing 'NAMESPACE'
i Loading inflate.no.vignette1116f651228539
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.twofuns1116f66e9fdc6d".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.authors1116f650e03254".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f67c74a87b".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f6f6f0ee9".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.tests1116f61fa259f7".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.examples1116f6580ec069".
i Loading inflate.examples1116f6580ec069
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_full.Rmd -------------------------------------------
v R: R/my_median.R was added to the config file
v tests: tests/testthat/test-my_median.R was added to the config file
v tests: tests/testthat/test-the_test.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating inflate.examples1116f6580ec069 documentation
i Loading inflate.examples1116f6580ec069
Writing 'NAMESPACE'
Writing 'my_median.Rd'
i Loading inflate.examples1116f6580ec069
[+] 3 package(s) added: stats, rmarkdown, testthat.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/vignette.name1116f611d6cfc6".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to
"/tmp/RtmptB1DWc/inflate.fun.in.roxygen1116f6d10dc7a".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
Created file .here in /tmp/RtmptB1DWc/twoexamples1116f67c8ca2e3 . Please start a new R session in the new project directory.
v Setting active project to "/tmp/RtmptB1DWc/twoexamples1116f67c8ca2e3".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to
"/tmp/RtmptB1DWc/inflate.fun.in.roxygen1116f649bc4d23".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/dummypackage_@
(special)1116f62dd27fd6".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/elugbvowcn1116f66b2c4756".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
Created file .here in /tmp/RtmptB1DWc/elugbvowcn1116f66b2c4756 . Please start a new R session in the new project directory.
-- config file for dev/flat_flat1.Rmd ------------------------------------------
-- config file for dev/flat_flat1.Rmd ------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflateall.first1116f677fb3aa8".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
x The flat file flat_minimal.Rmd is not going to be inflated. It was detected in your flats directory but it is absent from the config file.
Please inflate() it manually when you are ready, so that it is accounted the next time. Then you will be able to fully use `inflate_all*()`.
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.first1116f677fb3aa8 documentation
i Loading inflateall.first1116f677fb3aa8
Writing 'NAMESPACE'
i Loading inflateall.first1116f677fb3aa8
No flat files were inflated
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.first1116f677fb3aa8 documentation
i Loading inflateall.first1116f677fb3aa8
Deleting 'my_fun.Rd'
i Loading inflateall.first1116f677fb3aa8
! The flat file flat_minimal.Rmd is not going to be inflated because it is in state 'inactive or deprecated'
No flat files were inflated
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.first1116f677fb3aa8 documentation
i Loading inflateall.first1116f677fb3aa8
i Loading inflateall.first1116f677fb3aa8
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v The flat file flat_minimal.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.first1116f677fb3aa8 documentation
i Loading inflateall.first1116f677fb3aa8
Writing 'NAMESPACE'
Writing 'my_fun.Rd'
i Loading inflateall.first1116f677fb3aa8
v The flat file flat_minimal.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.first1116f677fb3aa8 documentation
i Loading inflateall.first1116f677fb3aa8
Writing 'NAMESPACE'
Writing 'new_fun2.Rd'
i Loading inflateall.first1116f677fb3aa8
-- config file for dev/flat_minimal_2.Rmd --------------------------------------
v The flat file flat_minimal.Rmd is going to be inflated
v The flat file flat_minimal_2.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- config file for dev/flat_minimal_2.Rmd --------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.first1116f677fb3aa8 documentation
i Loading inflateall.first1116f677fb3aa8
Writing 'NAMESPACE'
Writing 'my_fun.Rd'
Writing 'my_fun_from_flat_file2.Rd'
Writing 'new_fun2.Rd'
i Loading inflateall.first1116f677fb3aa8
-- config file for dev/flat_minimal_2.Rmd --------------------------------------
v The flat file flat_minimal.Rmd is going to be inflated
v The flat file flat_minimal_2.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- config file for dev/flat_minimal_2.Rmd --------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.first1116f677fb3aa8 documentation
i Loading inflateall.first1116f677fb3aa8
Writing 'NAMESPACE'
Writing 'my_fun.Rd'
i Loading inflateall.first1116f677fb3aa8
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
Created file .here in /tmp/RtmptB1DWc/inflateall.other.pkg1116f63e7a268 . Please start a new R session in the new project directory.
v Setting active project to
"/tmp/RtmptB1DWc/inflateall.other.pkg1116f63e7a268".
-- config file for dev/test_minimal.Rmd ----------------------------------------
-- config file for dev/test_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.other.pkg1116f63e7a268 documentation
i Loading inflateall.other.pkg1116f63e7a268
Writing 'NAMESPACE'
i Loading inflateall.other.pkg1116f63e7a268
v The flat file test_minimal.Rmd is going to be inflated
-- config file for dev/test_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflateall.other.pkg1116f63e7a268 documentation
i Loading inflateall.other.pkg1116f63e7a268
Writing 'NAMESPACE'
i Loading inflateall.other.pkg1116f63e7a268
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflateall.nocheck1116f644680153".
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to
"/tmp/RtmptB1DWc/inflateall.unregistered1116f67f4c6a44".
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v The flat file flat_minimal.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
cli-4117797-5087
Documentation parameters were restored from attachment config file.
Updating inflateall.unregistered1116f67f4c6a44 documentation
i Loading inflateall.unregistered1116f67f4c6a44
Writing 'NAMESPACE'
i Loading inflateall.unregistered1116f67f4c6a44
v R: R/unregistered_r.R was added to the config file
v tests: tests/testthat/test-unregistered_r.R was added to the config file
-- Delete dev/config_not_registered.csv ----------------------------------------
v The flat file flat_minimal.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
Documentation parameters were restored from attachment config file.
Updating inflateall.unregistered1116f67f4c6a44 documentation
i Loading inflateall.unregistered1116f67f4c6a44
Writing 'NAMESPACE'
i Loading inflateall.unregistered1116f67f4c6a44
v The flat file flat_minimal.Rmd is going to be inflated
Documentation parameters were restored from attachment config file.
Updating inflateall.unregistered1116f67f4c6a44 documentation
i Loading inflateall.unregistered1116f67f4c6a44
Writing 'NAMESPACE'
i Loading inflateall.unregistered1116f67f4c6a44
v The flat file flat_minimal.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
cli-4117797-5177
Documentation parameters were restored from attachment config file.
Updating inflateall.unregistered1116f67f4c6a44 documentation
i Loading inflateall.unregistered1116f67f4c6a44
Writing 'NAMESPACE'
Writing 'my_fun.Rd'
i Loading inflateall.unregistered1116f67f4c6a44
-- Delete dev/config_not_registered.csv ----------------------------------------
v The flat file flat_minimal.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
Documentation parameters were restored from attachment config file.
Updating inflateall.unregistered1116f67f4c6a44 documentation
i Loading inflateall.unregistered1116f67f4c6a44
Writing 'NAMESPACE'
i Loading inflateall.unregistered1116f67f4c6a44
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.empties1116f67a17b933".
-- config file for dev/flat_full.Rmd -------------------------------------------
-- config file for dev/flat_full.Rmd -------------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
Documentation parameters were restored from attachment config file.
Updating inflate.empties1116f67a17b933 documentation
i Loading inflate.empties1116f67a17b933
i Loading inflate.empties1116f67a17b933
-- config file for dev/flat_full.Rmd -------------------------------------------
-- config file for dev/flat_full.Rmd -------------------------------------------
-- check not registered files --------------------------------------------------
There are no files in the package. Did you inflate it once?
Documentation parameters were restored from attachment config file.
Updating inflate.empties1116f67a17b933 documentation
i Loading inflate.empties1116f67a17b933
i Loading inflate.empties1116f67a17b933
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflateall.stylers1116f6257f1a62".
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v The flat file flat_minimal.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
-- Let's apply stylers to the package ------------------------------------------
Documentation parameters were restored from attachment config file.
Updating inflateall.stylers1116f6257f1a62 documentation
i Loading inflateall.stylers1116f6257f1a62
Writing 'NAMESPACE'
i Loading inflateall.stylers1116f6257f1a62
v The flat file flat_minimal.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
-- Let's apply stylers to the package ------------------------------------------
Documentation parameters were restored from attachment config file.
Updating inflateall.stylers1116f6257f1a62 documentation
i Loading inflateall.stylers1116f6257f1a62
Writing 'NAMESPACE'
i Loading inflateall.stylers1116f6257f1a62
v The flat file flat_minimal.Rmd is going to be inflated
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- check not registered files --------------------------------------------------
v There are no unregistered files.
-- Let's apply stylers to the package ------------------------------------------
Documentation parameters were restored from attachment config file.
Updating inflateall.stylers1116f6257f1a62 documentation
i Loading inflateall.stylers1116f6257f1a62
Writing 'NAMESPACE'
i Loading inflateall.stylers1116f6257f1a62
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/jbtpzldqoh1116f62e8472d5".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
Created file .here in /tmp/RtmptB1DWc/jbtpzldqoh1116f62e8472d5 . Please start a new R session in the new project directory.
i Loading jbtpzldqoh1116f62e8472d5
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_flat1.Rmd ------------------------------------------
v R: R/flat1_rmd.R was added to the config file
v tests: tests/testthat/test-flat1_rmd.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating jbtpzldqoh1116f62e8472d5 documentation
i Loading jbtpzldqoh1116f62e8472d5
Writing 'NAMESPACE'
Writing 'flat1_rmd.Rd'
i Loading jbtpzldqoh1116f62e8472d5
[+] 2 package(s) added: rmarkdown, testthat.
i Computing code coverage - it might take some time
jbtpzldqoh1116f62e8472d5 Coverage: 0.00%
R/flat1_rmd.R: 0.00%
-- config file for dev/flat_flat1.Rmd ------------------------------------------
-- check not registered files --------------------------------------------------
-- config file for dev/flat_flat1.Rmd ------------------------------------------
-- check not registered files --------------------------------------------------
-- config file for dev/flat_flat1.Rmd ------------------------------------------
-- check not registered files --------------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/diag1116f66da69a03".
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- config file for dev/flat_minimal_2.Rmd --------------------------------------
v The flat file flat_minimal_2.Rmd is going to be inflated
v R: R/zaza.R was added to the config file
-- config file for dev/test_minimal.Rmd ----------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/readinflateparams1116f635e57329".
-- config file for dev/flat_minimal.Rmd ----------------------------------------
-- config file for dev/flat_minimal_2.Rmd --------------------------------------
v R: R/zaza.R was added to the config file
! Some paths appear multiple times in the config file. The yaml was forced with `force = TRUE`. Please verify the source of these scripts in the existing yaml file or in the df_files provided:
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/inflate.qmd1116f659b74b53".
-- config file for dev/dev-template-tests.qmd ----------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
[1] "==== inflate_utils ===="
v Setting active project to "/tmp/RtmptB1DWc/isrproj.pkg1116f6705bdb68".
v Adding "^isrproj\\.pkg1116f6705bdb68\\.Rproj$" to '.Rbuildignore'.
v Adding "^\\.Rproj\\.user$" to '.Rbuildignore'.
i Loading isrproj.pkg1116f6705bdb68
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_full.Rmd -------------------------------------------
v R: R/my_median.R was added to the config file
v R: R/my_other_median.R was added to the config file
v tests: tests/testthat/test-my_median.R was added to the config file
v tests: tests/testthat/test-my_other_median.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating isrproj.pkg1116f6705bdb68 documentation
i Loading isrproj.pkg1116f6705bdb68
Writing 'NAMESPACE'
Writing 'my_median.Rd'
Writing 'my_other_median.Rd'
Writing 'sub_median.Rd'
i Loading isrproj.pkg1116f6705bdb68
[+] 3 package(s) added: stats, rmarkdown, testthat.
v Setting active project to "/tmp/RtmptB1DWc/isrproj.pkg1116f6705bdb68".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/vignette.head1116f6581b4b18".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/checkpk.gname1116f6528ca9cb".
i Loading COUCOU
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_full.Rmd -------------------------------------------
v R: R/my_median.R was added to the config file
v R: R/my_other_median.R was added to the config file
v tests: tests/testthat/test-my_median.R was added to the config file
v tests: tests/testthat/test-my_other_median.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating checkpk.gname1116f6528ca9cb documentation
i Loading COUCOU
Writing 'NAMESPACE'
Writing 'my_median.Rd'
Writing 'my_other_median.Rd'
Writing 'sub_median.Rd'
i Loading COUCOU
[+] 3 package(s) added: stats, rmarkdown, testthat.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/clean1116f67c203486".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
! The flat file flat_minimal2.Rmd is not going to be inflated because it is 'inactive or deprecated'
v The flat file flat_minimal.Rmd is going to be inflated
v Setting active project to "/tmp/RtmptB1DWc/registered1116f6493058bf".
-- config file for dev/flat_full.Rmd -------------------------------------------
cli-4117797-6382
v R: R/my_median.R was added to the config file
v R: R/my_other_median.R was added to the config file
v tests: tests/testthat/test-my_median.R was added to the config file
v tests: tests/testthat/test-my_other_median.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
cli-4117797-6408
v R: R/to_keep.R was added to the config file
i Some files group already existed and were modified: keep
v R: R/to_keep.R was added to the config file
i Some files group already existed and were modified: keep
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/register1116f64d0ded3d/fusentest".
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/register1116f64d0ded3d/fusentest".
v R: R/to_keep.R was added to the config file
v There are no unregistered files.
-- config file for dev/flat_new_one.Rmd ----------------------------------------
v There are no unregistered files.
There is no file to register or everything was already registered
-- config file for dev/flat_new_one.Rmd ----------------------------------------
v There are no unregistered files.
There is no file to register or everything was already registered
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/register1116f61f7b7426".
-- config file for dev/flat_full.Rmd -------------------------------------------
-- Delete dev/config_not_registered.csv ----------------------------------------
cli-4117797-6690
-- Delete dev/config_not_registered.csv ----------------------------------------
i Some files group already existed and were modified: keep
i Some files group already existed and were modified: keep
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
! Some 'path' in df_files do not exist: row 1- R: zaza.R, row 2- R: zozo.R, row 3- test: test-zaza.R
However, you forced to write it in the yaml file with `force = TRUE`.
v R: zaza.R was added to the config file
v R: zozo.R was added to the config file
v tests: test-zaza.R was added to the config file
v R: zozo.R was added to the config file
v tests: test-zaza.R was added to the config file
v R: tata.R was added to the config file
v R: toto.R was added to the config file
v tests: test-tata.R was added to the config file
v vignettes: tata_vignette.Rmd was added to the config file
v R: zaza.R was added to the config file
v R: zozo.R was added to the config file
v tests: test-zaza.R was added to the config file
v Setting active project to "/tmp/RtmptB1DWc/dftoconfig1116f66bc5e386".
v R: R/my_fun.R was added to the config file
v tests: tests/testthat/test-my_fun.R was added to the config file
v vignettes: vignettes/minimal.Rmd was added to the config file
! Some paths in config_file do not exist: vignettes/minimal.Rmd .
Please open the configuration file: dev/config_fusen.yaml to verify, and delete the non-existing files if needed. However, you forced to write it in the yaml file with `force = TRUE`.
! vignettes: vignettes/minimal.Rmd was removed from the config file and from the repository
v R: R/my_fun2.R was added to the config file
v tests: tests/testthat/test-my_fun2.R was added to the config file
v vignettes: vignettes/minimal2.Rmd was added to the config file
i Some files group already existed and were modified: flat_minimal.Rmd
v Setting active project to "/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/clean1116f61115f655".
-- config file for dev/flat_full.Rmd -------------------------------------------
-- config file for dev/flat_full.Rmd -------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/rename1116f63d7e9162".
i The flat file /tmp/RtmptB1DWc/rename1116f63d7e9162/dev/flat_full.Rmd has been renamed to /tmp/RtmptB1DWc/rename1116f63d7e9162/dev/flat_new.Rmd
i The flat file dev/flat_new.Rmd has been renamed to dev/flat_other_new.Rmd
i The flat file flat_new.Rmd has been updated in the config file.
-- config file for dev/flat_other_new.Rmd --------------------------------------
i The flat file dev/flat_other_new.Rmd has been renamed to dev/flat_new2.Rmd
i The flat file flat_other_new.Rmd has been updated in the config file.
i The flat file flat_new2.Rmd has been updated in the inflated files.
i The flat file dev/flat_new2.Rmd has been renamed to otherdev/flat_new_with_path.Rmd
i The flat file flat_new2.Rmd has been updated in the config file.
i The flat file flat_new_with_path.Rmd has been updated in the inflated files.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/dywhobtags1116f64410cd10".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
i No flat files were detected.
i No fusen-related tags have been found in any files located in R/, tests/ and vignettes/ folders.
Created file .here in /tmp/RtmptB1DWc/dywhobtags1116f64410cd10 . Please start a new R session in the new project directory.
-- config file for dev/flat_flat1.Rmd ------------------------------------------
v Cleaning is done !
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/lbcsaxwfmy1116f64b85319a".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
i No fusen configuration file found. The flat files to be deleted will be identified as Rmd or qmd files starting with 'flat' in the dev/ and dev/flat_history folders.
i No fusen-related tags have been found in any files located in R/, tests/ and vignettes/ folders.
Created file .here in /tmp/RtmptB1DWc/lbcsaxwfmy1116f64b85319a . Please start a new R session in the new project directory.
i Loading lbcsaxwfmy1116f64b85319a
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_flat1.Rmd ------------------------------------------
v R: R/flat1_rmd.R was added to the config file
v tests: tests/testthat/test-flat1_rmd.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating lbcsaxwfmy1116f64b85319a documentation
i Loading lbcsaxwfmy1116f64b85319a
Writing 'NAMESPACE'
Writing 'flat1_rmd.Rd'
i Loading lbcsaxwfmy1116f64b85319a
[+] 2 package(s) added: rmarkdown, testthat.
i A fusen configuration file was found. The flat files to be deleted will be identified as files listed in this configuration file as well as Rmd or qmd files starting with 'flat' in the dev/ and dev/flat_history folders. The configuration file will also be deleted.
i The following files have been identified as containing fusen-related tags and will therefore be modified:
R/flat1_rmd.R
tests/testthat/test-flat1_rmd.R
vignettes/get-started.Rmd
v Cleaning is done !
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/lamxpyghie1116f6ef4eee3".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Creating 'R/'.
[ ] Edit 'R/some_R_file.R'.
v Adding testthat to 'Suggests' field in DESCRIPTION.
v Adding "3" to 'Config/testthat/edition'.
v Creating 'tests/testthat/'.
v Writing 'tests/testthat.R'.
v Writing 'tests/testthat/test-some_test.R'.
[ ] Edit 'tests/testthat/test-some_test.R'.
i No fusen configuration file found. The flat files to be deleted will be identified as Rmd or qmd files starting with 'flat' in the dev/ and dev/flat_history folders.
i No flat files were detected.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/vyztgkdiaw1116f65e2b5e9d".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
Created file .here in /tmp/RtmptB1DWc/vyztgkdiaw1116f65e2b5e9d . Please start a new R session in the new project directory.
i Loading vyztgkdiaw1116f65e2b5e9d
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_flat1.Rmd ------------------------------------------
v R: R/flat1_rmd.R was added to the config file
v tests: tests/testthat/test-flat1_rmd.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating vyztgkdiaw1116f65e2b5e9d documentation
i Loading vyztgkdiaw1116f65e2b5e9d
Writing 'NAMESPACE'
Writing 'flat1_rmd.Rd'
i Loading vyztgkdiaw1116f65e2b5e9d
[+] 2 package(s) added: rmarkdown, testthat.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/magywbtzvs1116f6718e224a".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
Created file .here in /tmp/RtmptB1DWc/magywbtzvs1116f6718e224a . Please start a new R session in the new project directory.
i Loading magywbtzvs1116f6718e224a
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_flat1.Rmd ------------------------------------------
v R: R/flat1_rmd.R was added to the config file
v tests: tests/testthat/test-flat1_rmd.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating magywbtzvs1116f6718e224a documentation
i Loading magywbtzvs1116f6718e224a
Writing 'NAMESPACE'
Writing 'flat1_rmd.Rd'
i Loading magywbtzvs1116f6718e224a
[+] 2 package(s) added: rmarkdown, testthat.
-- config file for dev/flat_flat2.Rmd ------------------------------------------
v R: R/flat2_rmd.R was added to the config file
v tests: tests/testthat/test-flat2_rmd.R was added to the config file
v vignettes: vignettes/get-started-2.Rmd was added to the config file
Documentation parameters were restored from attachment config file.
Updating magywbtzvs1116f6718e224a documentation
i Loading magywbtzvs1116f6718e224a
Writing 'NAMESPACE'
Writing 'flat2_rmd.Rd'
i Loading magywbtzvs1116f6718e224a
v The flat file flat_flat1.Rmd has been deprecated.
i A fusen configuration file was found. The flat files to be deleted will be identified as files listed in this configuration file as well as Rmd or qmd files starting with 'flat' in the dev/ and dev/flat_history folders. The configuration file will also be deleted.
v Cleaning is done !
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
Created file .here in /tmp/RtmptB1DWc/edopyqfrlm1116f682c353c . Please start a new R session in the new project directory.
v Setting active project to "/tmp/RtmptB1DWc/edopyqfrlm1116f682c353c".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/edopyqfrlm1116f682c353c".
i Loading edopyqfrlm1116f682c353c
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v R: R/my_fun.R was added to the config file
v tests: tests/testthat/test-my_fun.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating edopyqfrlm1116f682c353c documentation
i Loading edopyqfrlm1116f682c353c
Writing 'NAMESPACE'
Writing 'my_fun.Rd'
i Loading edopyqfrlm1116f682c353c
[+] 2 package(s) added: rmarkdown, testthat.
-- config file for dev/flat_xxx_flat2.Rmd --------------------------------------
v R: R/xxx_flat2_rmd.R was added to the config file
v tests: tests/testthat/test-xxx_flat2_rmd.R was added to the config file
v vignettes: vignettes/get-started-2.Rmd was added to the config file
Documentation parameters were restored from attachment config file.
Updating edopyqfrlm1116f682c353c documentation
i Loading edopyqfrlm1116f682c353c
Writing 'NAMESPACE'
Writing 'xxx_flat2_rmd.Rd'
i Loading edopyqfrlm1116f682c353c
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
Created file .here in /tmp/RtmptB1DWc/sqpyzgkhvo1116f610da47c7 . Please start a new R session in the new project directory.
v Setting active project to "/tmp/RtmptB1DWc/sqpyzgkhvo1116f610da47c7".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
i Loading sqpyzgkhvo1116f610da47c7
Writing 'NAMESPACE'
`vignette_name` is empty: no vignette created
-- config file for dev/flat_minimal.Rmd ----------------------------------------
v R: R/my_fun.R was added to the config file
v tests: tests/testthat/test-my_fun.R was added to the config file
Saving attachment parameters to yaml config file
Updating sqpyzgkhvo1116f610da47c7 documentation
i Loading sqpyzgkhvo1116f610da47c7
Writing 'NAMESPACE'
Writing 'my_fun.Rd'
i Loading sqpyzgkhvo1116f610da47c7
[+] 1 package(s) added: testthat.
v The flat file flat_minimal.Rmd has been deprecated.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/ihmjybwunk1116f64549be5f".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
Created file .here in /tmp/RtmptB1DWc/ihmjybwunk1116f64549be5f . Please start a new R session in the new project directory.
i Loading ihmjybwunk1116f64549be5f
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_flat1.Rmd ------------------------------------------
v R: R/flat1_rmd.R was added to the config file
v tests: tests/testthat/test-flat1_rmd.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating ihmjybwunk1116f64549be5f documentation
i Loading ihmjybwunk1116f64549be5f
Writing 'NAMESPACE'
Writing 'flat1_rmd.Rd'
i Loading ihmjybwunk1116f64549be5f
[+] 2 package(s) added: rmarkdown, testthat.
v The flat file flat_flat1.Rmd has been deprecated.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/fgpluzhtio1116f64ee5bae6".
v Adding "MIT + file LICENSE" to 'License'.
v Writing 'LICENSE'.
v Writing 'LICENSE.md'.
v Adding "^LICENSE\\.md$" to '.Rbuildignore'.
Created file .here in /tmp/RtmptB1DWc/fgpluzhtio1116f64ee5bae6 . Please start a new R session in the new project directory.
i Loading fgpluzhtio1116f64ee5bae6
Writing 'NAMESPACE'
v Adding knitr to 'Suggests' field in DESCRIPTION.
[ ] Use `requireNamespace("knitr", quietly = TRUE)` to test if knitr is
installed.
[ ] Then directly refer to functions with `knitr::fun()`.
v Adding "inst/doc" to '.gitignore'.
-- config file for dev/flat_flat1.Rmd ------------------------------------------
v R: R/flat1_rmd.R was added to the config file
v tests: tests/testthat/test-flat1_rmd.R was added to the config file
v vignettes: vignettes/get-started.Rmd was added to the config file
Saving attachment parameters to yaml config file
Updating fgpluzhtio1116f64ee5bae6 documentation
i Loading fgpluzhtio1116f64ee5bae6
Writing 'NAMESPACE'
Writing 'flat1_rmd.Rd'
i Loading fgpluzhtio1116f64ee5bae6
[+] 2 package(s) added: rmarkdown, testthat.
[ ] Edit 'R/donotfindme.R'.
v Writing 'tests/testthat/test-donotfindme.R'.
[ ] Edit 'tests/testthat/test-donotfindme.R'.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
v Setting active project to "/tmp/RtmptB1DWc/smfiqpblaw1116f6450357ee".
v Adding "MIT + file LICENSE" to 'License'.
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
-- Creating new directory: /tmp/RtmptB1DWc/all.templates.second.flat1116f634be34
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.second.flat1116f634be3444/foosen.process".
-- config file for dev/flat_first.Rmd ------------------------------------------
'0-dev_history.Rmd' already exists. It was not overwritten. Set `add_flat_template(overwrite = TRUE)` if you want to do so.
-- config file for dev/flat_second.Rmd -----------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
-- Creating new directory: /tmp/RtmptB1DWc/all.templates.second.flat1116f64c9518
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.second.flat1116f64c9518ee/foosen.process".
-- config file for dev/flat_first.Rmd ------------------------------------------
'0-dev_history.Rmd' already exists. It was not overwritten. Set `add_flat_template(overwrite = TRUE)` if you want to do so.
-- config file for dev/flat_second.Rmd -----------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
-- Creating new directory: /tmp/RtmptB1DWc/all.templates.second.flat1116f63424dc
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.second.flat1116f63424dc7b/foosen.process".
-- config file for dev/flat_first.Rmd ------------------------------------------
'0-dev_history.Rmd' already exists. It was not overwritten. Set `add_flat_template(overwrite = TRUE)` if you want to do so.
-- config file for dev/flat_second.Rmd -----------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
-- Creating new directory: /tmp/RtmptB1DWc/all.templates.second.flat1116f63da151
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.second.flat1116f63da1518d/foosen.process".
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
-- Creating new directory: /tmp/RtmptB1DWc/all.templates.second.flat1116f6333dab
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.second.flat1116f6333dab8/foosen.process".
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
-- config file for dev/flat_first.Rmd ------------------------------------------
-- config file for dev/flat_second.Rmd -----------------------------------------
-- check not registered files --------------------------------------------------
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
-- Creating new directory: /tmp/RtmptB1DWc/all.templates.second.flat1116f633ff5e
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.second.flat1116f633ff5eac/foosen.process".
v Setting active project to
"/tmp/RtmptB1DWc/all.templates.knitteaching1116f65a879c72".
[ FAIL 7 | WARN 19 | SKIP 14 | PASS 977 ]
══ Skipped tests (14) ══════════════════════════════════════════════════════════
• On CRAN (10): 'test-get_package_structure.R:19:3',
'test-get_package_structure.R:37:3', 'test-inflate-part1.R:245:5',
'test-inflate-part2.R:42:5', 'test-inflate-part2.R:85:7',
'test-inflate-part2.R:85:7', 'test-inflate-part2.R:85:7',
'test-inflate-part2.R:313:5', 'test-inflate-part2.R:467:7',
• empty test (1): 'test-inflate_utils.R:193:1'
• interactive() is not TRUE (3): 'test-inflate_all.R:388:5',
'test-init_share_on_github.R:4:3', 'test-skeleton.R:2:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-inflate-part3.R:54:3'): (code run outside of `test_that()`) ────
Error in `covr::package_coverage()`: Package installation did not succeed.
Backtrace:
▆
1. ├─usethis::with_project(...) at test-inflate-part3.R:7:1
2. │ └─base::force(code)
3. ├─utils::capture.output(...) at test-inflate-part3.R:54:3
4. │ └─base::withVisible(...elt(i))
5. └─fusen::inflate(...)
6. └─fusen:::compute_codecov(pkg = pkg)
7. ├─base::print(covr::package_coverage())
8. └─covr::package_coverage()
── Error ('test-inflate_all.R:363:5'): when check = FALSE we ensure no check has been performed ──
Error in `file(file, if (append) "a" else "w")`: cannot open the connection
Backtrace:
▆
1. └─utils::capture.output(...) at test-inflate_all.R:363:5
2. └─base::file(file, if (append) "a" else "w")
── Error ('test-sepuku.R:134:5'): sepuku informs the user about the files with fusen tags that were detected ──
Error in `file(file, ifelse(append, "a", "w"))`: cannot open the connection
Backtrace:
▆
1. └─fusen::add_minimal_flat(...) at test-sepuku.R:134:5
2. └─fusen::add_flat_template(...)
3. └─fusen:::local_file_ignore(...)
4. └─base::cat(enc2utf8(all), file = buildfile, sep = "\n")
5. └─base::file(file, ifelse(append, "a", "w"))
── Error ('test-sepuku_utils.R:207:5'): list_flat_files works with flat files in dev and a config file ──
Error in `file(path, open = file_mode, encoding = "utf-8")`: cannot open the connection
Backtrace:
▆
1. └─fusen::inflate(...) at test-sepuku_utils.R:207:5
2. └─fusen:::create_functions_all(parsed_tbl, fun_code, pkg, relative_flat_file)
3. └─fusen:::create_r_files(fun_code, pkg, relative_flat_file)
4. └─base::lapply(...)
5. └─fusen (local) FUN(X[[i]], ...)
6. └─fusen:::write_utf8(path = r_file, lines = lines)
7. └─base::file(path, open = file_mode, encoding = "utf-8")
── Error ('test-sepuku_utils.R:337:3'): (code run outside of `test_that()`) ────
Error in `file(file, if (append) "a" else "w")`: cannot open the connection
Backtrace:
▆
1. ├─usethis::with_project(...) at test-sepuku_utils.R:335:1
2. │ └─base::force(code)
3. └─usethis::use_mit_license("John Doe") at test-sepuku_utils.R:337:3
4. └─usethis:::proj_desc_field_update(...)
5. └─desc$write()
6. └─desc:::idesc_write(self, private, file)
7. └─desc:::write_dcf(mat, file = tmp, keep.white = names(private$data))
8. └─base::write.dcf(..., useBytes = TRUE)
9. └─base::file(file, if (append) "a" else "w")
── Error ('test-user-story.R:61:7'): full process -full- add and inflate new template ──
Error in `file(file, ifelse(append, "a", "w"))`: cannot open the connection
Backtrace:
▆
1. ├─base::suppressMessages(...) at test-user-story.R:61:7
2. │ └─base::withCallingHandlers(...)
3. └─fusen::inflate(...)
4. └─fusen:::document_and_check_pkg(...)
5. └─attachment::att_amend_desc(path = pkg)
6. └─attachment::att_from_examples(dir.r = dir.r)
7. └─base::cat(all_examples_clean, file = roxy_file, sep = "\n")
8. └─base::file(file, ifelse(append, "a", "w"))
── Error ('test-user-story.R:35:5'): (code run outside of `test_that()`) ───────
Error in `file(path, open = file_mode, encoding = "utf-8")`: cannot open the connection
Backtrace:
▆
1. ├─usethis::with_project(...) at test-user-story.R:21:3
2. │ └─base::force(code)
3. ├─base::suppressMessages(...) at test-user-story.R:35:5
4. │ └─base::withCallingHandlers(...)
5. └─fusen::inflate(...)
6. └─fusen:::create_functions_all(parsed_tbl, fun_code, pkg, relative_flat_file)
7. └─fusen:::create_r_files(fun_code, pkg, relative_flat_file)
8. └─base::lapply(...)
9. └─fusen (local) FUN(X[[i]], ...)
10. └─fusen:::write_utf8(path = r_file, lines = lines)
11. └─base::file(path, open = file_mode, encoding = "utf-8")
[ FAIL 7 | WARN 19 | SKIP 14 | PASS 977 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc