Last updated on 2026-06-29 09:52:32 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.9.0 | 6.87 | 149.42 | 156.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.10.0 | 4.92 | 97.99 | 102.91 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.10.0 | 11.00 | 391.49 | 402.49 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.10.0 | 11.00 | 412.29 | 423.29 | OK | |
| r-devel-windows-x86_64 | 2.10.0 | 11.00 | 142.00 | 153.00 | OK | |
| r-patched-linux-x86_64 | 2.9.0 | 8.39 | 142.98 | 151.37 | OK | |
| r-release-linux-x86_64 | 2.10.0 | OK | ||||
| r-release-macos-arm64 | 2.10.0 | 2.00 | 33.00 | 35.00 | OK | |
| r-release-macos-x86_64 | 2.10.0 | 5.00 | 165.00 | 170.00 | OK | |
| r-release-windows-x86_64 | 2.9.0 | 10.00 | 148.00 | 158.00 | OK | |
| r-oldrel-macos-arm64 | 2.10.0 | 1.00 | 39.00 | 40.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.10.0 | 5.00 | 133.00 | 138.00 | OK | |
| r-oldrel-windows-x86_64 | 2.10.0 | 13.00 | 176.00 | 189.00 | OK |
Version: 2.10.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(loo)
This is loo version 2.10.0
- Online documentation and vignettes at mc-stan.org/loo
- As of v2.0.0 loo defaults to 1 core but we recommend using as many as possible. Use the 'cores' argument or set options(mc.cores = NUM_CORES) for an entire session.
> library(testthat)
Attaching package: 'testthat'
The following object is masked from 'package:loo':
compare
> Sys.setenv("R_TESTS" = "")
> test_check("loo")
Starting 2 test processes.
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: outer(X, Y)
> test_loo_and_waic.R: 2: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_and_waic.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_and_waic.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: FUN(X[[i]], ...)
> test_loo_and_waic.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_and_waic.R: 18: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, method = is_method)
> test_loo_and_waic.R: 19: loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 20: loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 21: withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning"))
> test_loo_and_waic.R: 22: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R: 23: eval(code, test_env)
> test_loo_and_waic.R: 24: eval(code, test_env)
> test_loo_and_waic.R: 25: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 28: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 29: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 31: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
> test_loo_and_waic.R: end_test = function() { })
> test_loo_and_waic.R: 33: test_code(code, parent.frame())
> test_loo_and_waic.R: 34: test_that("loo with cores=1 and cores=2 gives same results", { loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: 35: eval(code, test_env)
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: 37: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 43: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 44: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_and_waic.R: 47: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_and_waic.R: 54: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5adcde89"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5adcde89"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", compress = FALSE)
> test_loo_and_waic.R: 58: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5adcde89"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_and_waic.R: 59: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 60: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 61: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_and_waic.R: 62: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63:
> test_loo_and_waic.R: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_and_waic.R: 64: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 65: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5adcde89"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: outer(X, Y)
> test_loo_and_waic.R: 2: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_and_waic.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_and_waic.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: FUN(X[[i]], ...)
> test_loo_and_waic.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_and_waic.R: 18: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, method = is_method)
> test_loo_and_waic.R: 19: loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 20: loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 21: withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning"))
> test_loo_and_waic.R: 22: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R: 23: eval(code, test_env)
> test_loo_and_waic.R: 24: eval(code, test_env)
> test_loo_and_waic.R: 25: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 28: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 29: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 31:
> test_loo_and_waic.R: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 33: test_code(code, parent.frame())
> test_loo_and_waic.R: 34: test_that("loo with cores=1 and cores=2 gives same results", { loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: 35: eval(code, test_env)
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: 37: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 43: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 44: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_and_waic.R: 47: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_and_waic.R: 54: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5adcde89"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5adcde89"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", compress = FALSE)
> test_loo_and_waic.R: 58: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5adcde89"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) {
> test_loo_and_waic.R: callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_and_waic.R: 59: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 60: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 61: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_and_waic.R: 62: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_and_waic.R: 64: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 65: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5adcde89"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f5a9622f9", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_and_waic-30.R
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2: -theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 10: 1: outer(X, Y)
> test_loo_predictive_metric.R: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) 2: prefix <- paste("Error in", dcall, ": ")-theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: LONG <- 75L 4: sm <- strsplit(conditionMessage(e), "\n")[[1L]]psis_smooth_tail(lw_tail, cutoff) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : "
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: .Internal(printDeferredWarnings()) 9: } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_predictive_metric.R: 12: tryCatchOne(expr, names, parentenv, handlers[[1L]])try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ")FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) 16: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: type = "b")do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, if (w > LONG) method = method) prefix <- paste0(prefix, "\n ")
> test_loo_predictive_metric.R: }18: else prefix <- "Error : "importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, msg <- paste0(prefix, conditionMessage(e), "\n") method = "psis") .Internal(seterrmessage(msg[1L]))
> test_loo_predictive_metric.R: if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))19: })psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 20: psis(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 13: 21: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))eval(code, test_env)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 14: 22: FUN(X[[i]], ...)eval(code, test_env)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 15: 23: lapply(seq_len(cores), inner.do)withCallingHandlers({
> test_loo_predictive_metric.R: eval(code, test_env)16: new_expectations <- the$test_expectations > starting_expectationsparallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: if (snapshot_skipped) {do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, skip("On CRAN") method = method) }
> test_loo_predictive_metric.R: else if (!new_expectations && skip_on_empty) {18: skip_empty()importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, } method = "psis")}, expectation = handle_expectation, packageNotFoundError = function(e) {
> test_loo_predictive_metric.R: if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 19: psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)20:
> test_loo_predictive_metric.R: psis(-LL, r_eff = r_eff, cores = 2)27:
> test_loo_predictive_metric.R: 21: eval(code, test_env)
> test_loo_predictive_metric.R: 22: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }eval(code, test_env)}, expectation = handle_expectation, packageNotFoundError = function(e) {
> test_loo_predictive_metric.R: if (on_cran()) {23: skip(paste0("{", e$package, "} is not installed."))withCallingHandlers({ } eval(code, test_env)}, snapshot_on_cran = function(cnd) { new_expectations <- the$test_expectations > starting_expectations snapshot_skipped <<- TRUE if (snapshot_skipped) { invokeRestart("muffle_cran_snapshot") skip("On CRAN")}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart) else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {
> test_loo_predictive_metric.R: snapshot_skipped <<- TRUE29: invokeRestart("muffle_cran_snapshot")withOneRestart(expr, restarts[[1L]])}, skip = handle_skip, warning = handle_warning, message = handle_message,
> test_loo_predictive_metric.R: error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 30: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()26: }tryCatchList(expr, classes, parentenv, handlers)}, expectation = handle_expectation, packageNotFoundError = function(e) {
> test_loo_predictive_metric.R: if (on_cran()) {27: skip(paste0("{", e$package, "} is not installed."))tryCatch(withCallingHandlers({ } eval(code, test_env)}, snapshot_on_cran = function(cnd) { new_expectations <- the$test_expectations > starting_expectations snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% if (snapshot_skipped) { skip("On CRAN") } StopReporter$new())
> test_loo_predictive_metric.R: 32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call) else if (!new_expectations && skip_on_empty) {
> test_loo_predictive_metric.R: skip_empty()33: }test_one_file(path, env = the$testing_env, shuffle = shuffle)}, expectation = handle_expectation, packageNotFoundError = function(e) {
> test_loo_predictive_metric.R: if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }
> test_loo_predictive_metric.R: }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: 29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 34: 30: doTryCatch(return(expr), name, parentenv, handler)withRestarts(tryCatch(withCallingHandlers({
> test_loo_predictive_metric.R: eval(code, test_env)35: new_expectations <- the$test_expectations > starting_expectationstryCatchOne(expr, names, parentenv, handlers[[1L]]) if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()
> test_loo_predictive_metric.R: }36: }, expectation = handle_expectation, packageNotFoundError = function(e) {tryCatchList(expr, classes, parentenv, handlers) if (on_cran()) {
> test_loo_predictive_metric.R: skip(paste0("{", e$package, "} is not installed."))37: }tryCatch(code, testthat_abort_reporter = function(cnd) {}, snapshot_on_cran = function(cnd) { cat(conditionMessage(cnd), "\n") snapshot_skipped <<- TRUE NULL invokeRestart("muffle_cran_snapshot")})}, skip = handle_skip, warning = handle_warning, message = handle_message,
> test_loo_predictive_metric.R: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), 38: end_test = function() {with_reporter(multi, test_one_file(path, env = the$testing_env, }) shuffle = shuffle))
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 31: 39: test_code(code = exprs, env = env, reporter = get_reporter() %||% asNamespace("testthat")$queue_task(path, shuffle) StopReporter$new())
> test_loo_predictive_metric.R: 32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_predictive_metric.R: 33: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 40: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: })(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))34:
> test_loo_predictive_metric.R: doTryCatch(return(expr), name, parentenv, handler)41:
> test_loo_predictive_metric.R: (function (what, args, quote = FALSE, envir = parent.frame()) 35: {tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (!is.list(args))
> test_loo_predictive_metric.R: stop("second argument must be a list")36: if (quote) tryCatchList(expr, classes, parentenv, handlers) args <- lapply(args, enquote)
> test_loo_predictive_metric.R: .Internal(do.call(what, args, envir))37: })(base::quote(function (path, shuffle) tryCatch(code, testthat_abort_reporter = function(cnd) {{ cat(conditionMessage(cnd), "\n") asNamespace("testthat")$queue_task(path, shuffle) NULL}), base::quote(list("test_loo_predictive_metric.R", FALSE)), }) envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 38: 42: with_reporter(multi, test_one_file(path, env = the$testing_env, base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5929b35e"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_predictive_metric.R: 43: shuffle = shuffle))base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5929b35e"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", compress = FALSE)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 39: 44: asNamespace("testthat")$queue_task(path, shuffle)base::withCallingHandlers({
> test_loo_predictive_metric.R: {40: NULL(function (path, shuffle) NULL{ } asNamespace("testthat")$queue_task(path, shuffle) base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5929b35e"), })(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE)) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv,
> test_loo_predictive_metric.R: quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", 41: compress = FALSE)(function (what, args, quote = FALSE, envir = parent.frame()) base::flush(base::stdout()){ base::flush(base::stderr()) if (!is.list(args)) { stop("second argument must be a list") NULL if (quote) NULL args <- lapply(args, enquote) } .Internal(do.call(what, args, envir)) base::invisible()})(base::quote(function (path, shuffle) }, error = function(e) {{ { asNamespace("testthat")$queue_task(path, shuffle) callr_data <- base::as.environment("tools:callr")$`__callr_data__`}), base::quote(list("test_loo_predictive_metric.R", FALSE)), err <- callr_data$err envir = base::quote(<environment>), quote = base::quote(TRUE)) if (FALSE) {
> test_loo_predictive_metric.R: base::assign(".Traceback", base::.traceback(4), envir = callr_data)42: utils::dump.frames("__callr_dump__")base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5929b35e"), base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, envir = callr_data) quote = TRUE) base::rm("__callr_dump__", envir = .GlobalEnv)
> test_loo_predictive_metric.R: }43: e <- err$process_call(e)base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5929b35e"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", compress = FALSE)
> test_loo_predictive_metric.R: e2 <- err$new_error("error in callr subprocess")44: class <- base::classbase::withCallingHandlers({ class(e2) <- base::c("callr_remote_error", class(e2)) { e2 <- err$add_trace_back(e2) NULL cut <- base::which(e2$trace$scope == "global")[1] NULL if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5929b35e"), } base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, if (callr_data$has_otel) { quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", ".error")) } {}, interrupt = function(e) { NULL { NULL callr_data <- base::as.environment("tools:callr")$`__callr_data__` } err <- callr_data$err base::invisible() if (FALSE) {}, error = function(e) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) { utils::dump.frames("__callr_dump__") callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, err <- callr_data$err envir = callr_data) if (FALSE) { base::rm("__callr_dump__", envir = .GlobalEnv) base::assign(".Traceback", base::.traceback(4), envir = callr_data) } utils::dump.frames("__callr_dump__") e <- err$process_call(e) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, e2 <- err$new_error("error in callr subprocess") envir = callr_data) class <- base::class base::rm("__callr_dump__", envir = .GlobalEnv) class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) e <- err$process_call(e) cut <- base::which(e2$trace$scope == "global")[1] e2 <- err$new_error("error in callr subprocess") if (!base::is.na(cut)) { class <- base::class e2$trace <- e2$trace[-(1:cut), ] class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) if (callr_data$has_otel) { cut <- base::which(e2$trace$scope == "global")[1] callr_data$otel_span$record_exception(e2) if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) {
> test_loo_predictive_metric.R: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", callr_data$otel_span$record_exception(e2) ".error")) } }}, callr_message = function(e) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", base::try({ ".error")) callr_data <- base::as.environment("tools:callr")$`__callr_data__` } pxlib <- callr_data$pxlib}, interrupt = function(e) { if (base::is.null(e$code)) { { e$code <- "301" callr_data <- base::as.environment("tools:callr")$`__callr_data__` } err <- callr_data$err msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, if (FALSE) { NULL))) base::assign(".Traceback", base::.traceback(4), envir = callr_data) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", utils::dump.frames("__callr_dump__") msg) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, if (callr_data$has_otel) { envir = callr_data) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } base::rm("__callr_dump__", envir = .GlobalEnv) }) }}) e <- err$process_call(e)
> test_loo_predictive_metric.R: e2 <- err$new_error("error in callr subprocess")45: class <- base::classdoTryCatch(return(expr), name, parentenv, handler) class(e2) <- base::c("callr_remote_error", class(e2))
> test_loo_predictive_metric.R: e2 <- err$add_trace_back(e2)46: cut <- base::which(e2$trace$scope == "global")[1]tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2)
> test_loo_predictive_metric.R: }47: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) ".error"))
> test_loo_predictive_metric.R: }48: }, callr_message = function(e) {doTryCatch(return(expr), name, parentenv, handler) base::try({
> test_loo_predictive_metric.R: callr_data <- base::as.environment("tools:callr")$`__callr_data__`49: pxlib <- callr_data$pxlibtryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), if (base::is.null(e$code)) { names[nh], parentenv, handlers[[nh]]) e$code <- "301"
> test_loo_predictive_metric.R: }50: msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, tryCatchList(expr, classes, parentenv, handlers) NULL)))
> test_loo_predictive_metric.R: data <- base::paste0(e$code, " ", base::nchar(msg), "\n", 51: msg)base::tryCatch(base::withCallingHandlers({ if (callr_data$has_otel) { { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { NULL base::invokeRestart("cli_message_handled") NULL } } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5929b35e"), base::invokeRestart("muffleMessage") base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, } quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", }) compress = FALSE)}) base::flush(base::stdout())
> test_loo_predictive_metric.R: base::flush(base::stderr())45: {doTryCatch(return(expr), name, parentenv, handler) NULL
> test_loo_predictive_metric.R: NULL46: }tryCatchOne(expr, names, parentenv, handlers[[1L]]) base::invisible()
> test_loo_predictive_metric.R: }, error = function(e) {47: {tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) callr_data <- base::as.environment("tools:callr")$`__callr_data__`
> test_loo_predictive_metric.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 49: err <- callr_data$errtryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), if (FALSE) { names[nh], parentenv, handlers[[nh]]) base::assign(".Traceback", base::.traceback(4), envir = callr_data)
> test_loo_predictive_metric.R: utils::dump.frames("__callr_dump__")50: base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, tryCatchList(expr, classes, parentenv, handlers) envir = callr_data)
> test_loo_predictive_metric.R: 51: base::tryCatch(base::withCallingHandlers({ { base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-fun-1235f5929b35e"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, class(e2) <- base::c("callr_remote_error", class(e2)) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) e2 <- err$add_trace_back(e2) { cut <- base::which(e2$trace$scope == "global")[1] NULL if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) NULL } base::invisible()}, error = function(e) { { } callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", err <- callr_data$err ".error")) if (FALSE) { } base::assign(".Traceback", base::.traceback(4), envir = callr_data)}, interrupt = function(e) { utils::dump.frames("__callr_dump__") { base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, callr_data <- base::as.environment("tools:callr")$`__callr_data__` envir = callr_data) err <- callr_data$err base::rm("__callr_dump__", envir = .GlobalEnv) if (FALSE) { } base::assign(".Traceback", base::.traceback(4), envir = callr_data) e <- err$process_call(e) utils::dump.frames("__callr_dump__") e2 <- err$new_error("error in callr subprocess") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, class <- base::class envir = callr_data) class(e2) <- base::c("callr_remote_error", class(e2)) base::rm("__callr_dump__", envir = .GlobalEnv) e2 <- err$add_trace_back(e2) } cut <- base::which(e2$trace$scope == "global")[1] e <- err$process_call(e) if (!base::is.na(cut)) { e2 <- err$new_error("error in callr subprocess") e2$trace <- e2$trace[-(1:cut), ] class <- base::class } class(e2) <- base::c("callr_remote_error", class(e2)) if (callr_data$has_otel) { e2 <- err$add_trace_back(e2) callr_data$otel_span$record_exception(e2) cut <- base::which(e2$trace$scope == "global")[1] } if (!base::is.na(cut)) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", e2$trace <- e2$trace[-(1:cut), ] ".error")) } } if (callr_data$has_otel) {}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__`
> test_loo_predictive_metric.R: err <- callr_data$err callr_data$otel_span$record_exception(e2) if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) } utils::dump.frames("__callr_dump__") base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", ".error")) }}, callr_message = function(e) { base::try({ base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, callr_data <- base::as.environment("tools:callr")$`__callr_data__` envir = callr_data) pxlib <- callr_data$pxlib base::rm("__callr_dump__", envir = .GlobalEnv) if (base::is.null(e$code)) { } e$code <- "301" e <- err$process_call(e) } e2 <- err$new_error("error in callr subprocess") msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, class <- base::class NULL))) class(e2) <- base::c("callr_remote_error", class(e2)) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", e2 <- err$add_trace_back(e2) msg) cut <- base::which(e2$trace$scope == "global")[1] if (callr_data$has_otel) { if (!base::is.na(cut)) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::invokeRestart("cli_message_handled") base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpx5bHpW/callr-rs-result-1235f40bf0e0d", ".error")) }}, callr_message = function(e) { } base::try({ else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::invokeRestart("muffleMessage") pxlib <- callr_data$pxlib } if (base::is.null(e$code)) { }) e$code <- "301"}), error = function(e) { } { msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL NULL))) NULL data <- base::paste0(e$code, " ", base::nchar(msg), "\n", } msg) if (FALSE) { if (callr_data$has_otel) { base::try(base::stop(e)) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } } if (FALSE) { pxlib$write_fd(3L, data) base::q(save = "no", status = 1) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { } base::invokeRestart("muffleMessage") base::invisible() }}, interrupt = function(e) { }) {}), error = function(e) { NULL { NULL NULL } NULL if (FALSE) { } base::q(save = "no", status = 1) if (FALSE) { } base::try(base::stop(e)) base::invisible() }}) if (FALSE) {
> test_loo_predictive_metric.R: base::q(save = "no", status = 1)An irrecoverable exception occurred. R is aborting now ...
> test_loo_predictive_metric.R: } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_predictive_metric-4.R
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (32): 'test_loo_subsampling_cases.R:4:3',
'test_loo_subsampling_cases.R:256:3', 'test_E_loo.R:134:1',
'test_E_loo.R:142:1', 'test_compare.R:91:1', 'test_compare.R:122:1',
'test_compare.R:160:1', 'test_crps.R:27:1',
'test_deprecated_extractors.R:8:1', 'test_deprecated_extractors.R:106:1',
'test_gpdfit.R:1:1', 'test_kfold_helpers.R:139:1',
'test_loo_and_waic.R:23:1', 'test_loo_moment_matching.R:157:1',
'test_loo_moment_matching.R:247:1', 'test_loo_moment_matching.R:365:1',
'test_model_weighting.R:69:1', 'test_print_plot.R:41:1',
'test_print_plot.R:45:1', 'test_print_plot.R:151:1',
'test_print_plot.R:169:1', 'test_print_plot.R:175:1',
'test_print_plot.R:181:1', 'test_psis.R:13:1', 'test_psis.R:39:1',
'test_psislw.R:15:1', 'test_relative_eff.R:7:1', 'test_relative_eff.R:43:3',
'test_loo_subsampling.R:896:3', 'test_loo_subsampling.R:1077:3',
'test_tisis.R:76:1', 'test_tisis.R:213:1'
• Sys.info()[["sysname"]] == "Darwin" && R.version$arch == "aarch64" is TRUE
(2): 'test_loo_moment_matching.R:468:3', 'test_psis.R:157:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_loo_and_waic.R:30:3'): loo with cores=1 and cores=2 gives same results ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─base::suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) at test_loo_and_waic.R:30:3
2. │ └─base::withCallingHandlers(...)
3. ├─loo::loo(LLarr, r_eff = r_eff_arr, cores = 2)
4. └─loo::loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
5. └─loo:::importance_sampling.array(...)
6. └─loo:::do_importance_sampling(...)
7. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
8. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
── Error ('test_loo_predictive_metric.R:4:1'): (code run outside of `test_that()`) ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─loo::psis(-LL, r_eff = r_eff, cores = 2) at test_loo_predictive_metric.R:4:1
2. └─loo:::psis.matrix(-LL, r_eff = r_eff, cores = 2)
3. └─loo:::importance_sampling.matrix(...)
4. └─loo:::do_importance_sampling(...)
5. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
6. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64